| Protein: | gar-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 682 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
|
Region A: Residues: [1-397] |
1 11 21 31 41 51
| | | | | |
1 MPNYTVPPDP ADTSWDSPYS IPVQIVVWII IIVLSLETII GNAMVVMAYR IERNISKQVS 60
61 NRYIVSLAIS DLIIGIEGFP FFTVYVLNGD RWPLGWVACQ TWLFLDYTLC LVSILTVLLI 120
121 TADRYLSVCH TAKYLKWQSP TKTQLLIVMS WLLPAIIFGI MIYGWQAMTG QSTSMSGAEC 180
181 SAPFLSNPYV NMGMYVAYYW TTLVAMLILY KGIHQAAKNL EKKAKAKERR HIALILSQRL 240
241 GTQVGVSLML QSKAEKEKAE EAQKDSGYTS NQAGGSLNTE NDQNLGVIEE ERSGFLSRRE 300
301 SNESYYPGPH PTAANSRRCS EMEKVSLLSE SDGVPSTRPA KSYGRLSLRS RYSASESITT 360
361 THENDEKEVE KADSLQKLFA DDELGSVLNF KEEKLKN
|
| Detection Method: |  |
| Confidence: | 7.86 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
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Region A: Residues: [398-505] |
1 11 21 31 41 51
| | | | | |
1 TDSNNDSDTT SVILQRSRKY KKNKRPRSSR RSEHSTPRQI AKVKQAEGTA AQLIEESVPD 60
61 DDQTETIEVK RTDRWVVSMK KRIARALIRR RSTTRPERGS SSNSDDSS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
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Region A: Residues: [506-682] |
1 11 21 31 41 51
| | | | | |
1 SEVEGEEKPE VRNNGLKIPQ LTVNNENRGE TSSQPGRDRL APPNKTDTFL SASGVSRKIS 60
61 TISTVITREK VISSIFAPIA VFNRGRKQTK AEKRAHKAFR TITFIVGFFA ILWSPYYIMA 120
121 TVYGFCKGEC IPSFLYTLSY YMCYLNSSGN PFAYALANRQ FRSAFMRMFR GNFNKVA
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| Detection Method: | |
| Confidence: | 39.0 |
| Match: | 2j4yA |
| Description: | No description for 2j4yA was found. |
