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Protein Overview: CE29665

General Information:
Name(s) found: CE29665 [WormBase]
Description(s) found:
Found 20 descriptions.
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  • WBGene00015783 Putative sarcosine oxidase status:Confirmed UniProt:Q18006 protein_id:CCD64563.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 384 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: electron transport [IEALink to PubMed article]
    tetrahydrofolate metabolic process [IEALink to PubMed article]
    Molecular Function: oxidoreductase activity [IEALink to PubMed article]
    sarcosine oxidase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTDYDVVVV GAGIFGSCTA YNCQKIGLKT LLLEQFELGH KNGSSHGKSR ITRYAHTEVE  60
   61 YVDLVGDAYN QIFELERIRG EKLWKKTGLL WVSTGNEVEK IHTNLKLKGI KHEVIKGTEV 120
  121 GKRYPQFKFD DSWNGLIDPM GGVIYADKWL NAFRDEFKKI GGIIHDREIV LSHSEISNNL 180
  181 FVTTNKSRYS SKKIIFTVGC WITKFLPDLK FNIEPISISV CYWKTKNESD SHLLNEDHYP 240
  241 VVIAQEMDLQ VFHYSLPDTD YPGSMKFCYH FGDALTQDLA HPAQRSQRCI DLPAKFIQKY 300
  301 MPVVDGSAPT RIDKCIYTNS PDDHYIIGTI PTKNPNILVG GCGSGSGFKV APGIGKALAE 360
  361 MAAGKKTTVD VSFFSANRFK PSKI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..384] PSI-BLAST 61.0 Sarcosine oxidase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity, acting on sulfur group of donors, NAD or NADP as acceptor
    		•  1.61125987248836 bayes_pls_golite062009
  • oxidoreductase activity, acting on sulfur group of donors
    		•  1.07245967881566 bayes_pls_golite062009
  • catalytic activity
    		•  1.03127962968326 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.943208146517927 bayes_pls_golite062009
  • dihydrolipoyl dehydrogenase activity
    		•  0.681230241795345 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors
    		•  0.397770205910041 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.86

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle