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View Structure Prediction Details

Protein: CE29665
Organism: Caenorhabditis elegans
Length: 384 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE29665.

Description E-value Query
Range
Subject
Range
gi|88925520, gi|... - gi|88944849|ref|ZP_01148072.1| proline dehydrogenase, beta subunit [Desulfotomaculum reducens MI-1],...
244.0 [0..1] [384..1]

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Predicted Domain #1
Region A:
Residues: [1-384]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTDYDVVVV GAGIFGSCTA YNCQKIGLKT LLLEQFELGH KNGSSHGKSR ITRYAHTEVE  60
   61 YVDLVGDAYN QIFELERIRG EKLWKKTGLL WVSTGNEVEK IHTNLKLKGI KHEVIKGTEV 120
  121 GKRYPQFKFD DSWNGLIDPM GGVIYADKWL NAFRDEFKKI GGIIHDREIV LSHSEISNNL 180
  181 FVTTNKSRYS SKKIIFTVGC WITKFLPDLK FNIEPISISV CYWKTKNESD SHLLNEDHYP 240
  241 VVIAQEMDLQ VFHYSLPDTD YPGSMKFCYH FGDALTQDLA HPAQRSQRCI DLPAKFIQKY 300
  301 MPVVDGSAPT RIDKCIYTNS PDDHYIIGTI PTKNPNILVG GCGSGSGFKV APGIGKALAE 360
  361 MAAGKKTTVD VSFFSANRFK PSKI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 61.0
Match: 1el5A
Description: Sarcosine oxidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
oxidoreductase activity, acting on sulfur group of donors, NAD or NADP as acceptor 1.61125987248836 bayes_pls_golite062009
oxidoreductase activity, acting on sulfur group of donors 1.07245967881566 bayes_pls_golite062009
catalytic activity 1.03127962968326 bayes_pls_golite062009
oxidoreductase activity 0.943208146517927 bayes_pls_golite062009
dihydrolipoyl dehydrogenase activity 0.681230241795345 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-NH2 group of donors 0.397770205910041 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle