YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: lgc-9

General Information:
Name(s) found: lgc-9 / CE29558 [WormBase]
Description(s) found:
Found 19 descriptions.
SHOW ALL
  • WBGene00015412 locus:lgc-9 status:Partially_confirmed UniProt:O44452 protein_id:CCD62195.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 464 amino acids

    Gene Ontology:
    Cellular Component: postsynaptic membrane [IEALink to PubMed article]
    membrane [IEALink to PubMed article]
    integral to membrane [IEALink to PubMed article]
    Biological Process: ion transport [IEALink to PubMed article]
    transport [IEALink to PubMed article]
    Molecular Function: neurotransmitter receptor activity [IEALink to PubMed article]
    extracellular ligand-gated ion channel activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYFIQLLSVL ISMKVGHIRS SRLLQHSQHG HYEDDYIKTE PTHLIETIQR RYDKRVRPFA  60
   61 ESNRPVIVHM TIVLGILTEV RENQQVASFV ISHVQKWRDP KLAWNPADHS GLTQVVMPRS 120
  121 LVWVPKLFIY NSMDTKDMLT DDRYDVRIQH TGHVKVNSPQ FVSTLCRINI DLFPFDTQFC 180
  181 AIALASPLLS VEEMDVNATQ PPVDSYFSGN AEWQVMNVTV KQMKFMEEGE YRAEVHYILH 240
  241 LNRRPTYYIT VIVVPTFLIS ALSILGIFSP GSNDGPRNEK VSLGLGSLLA MTVLLDIVAG 300
  301 AMPKSDAIPL LGYYIMLVIL LCAIGVAVSM AMLSMSRSCI QTSKMPPPHY YRLLFLNVCR 360
  361 VVKQNSGLNG VAMNEKPTAI TPRFPDLIAI YNQLIEVARA QRTYRERIEK QKWQHRVEIE 420
  421 WNKIFARIDF FFLFLFEMFN VLILVLFLRC AFLPVPPLPE NFSI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..464] PSI-BLAST 77.0 Refined structure of the nicotinic acetylcholine receptor at 4A resolution.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle