| Protein: | lgc-9 |
| Organism: | Caenorhabditis elegans |
| Length: | 464 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for lgc-9.
| Description | E-value | Query Range |
Subject Range |
|
|
366.0 | [0..19] | [450..181] |
|
Region A: Residues: [1-464] |
1 11 21 31 41 51
| | | | | |
1 MYFIQLLSVL ISMKVGHIRS SRLLQHSQHG HYEDDYIKTE PTHLIETIQR RYDKRVRPFA 60
61 ESNRPVIVHM TIVLGILTEV RENQQVASFV ISHVQKWRDP KLAWNPADHS GLTQVVMPRS 120
121 LVWVPKLFIY NSMDTKDMLT DDRYDVRIQH TGHVKVNSPQ FVSTLCRINI DLFPFDTQFC 180
181 AIALASPLLS VEEMDVNATQ PPVDSYFSGN AEWQVMNVTV KQMKFMEEGE YRAEVHYILH 240
241 LNRRPTYYIT VIVVPTFLIS ALSILGIFSP GSNDGPRNEK VSLGLGSLLA MTVLLDIVAG 300
301 AMPKSDAIPL LGYYIMLVIL LCAIGVAVSM AMLSMSRSCI QTSKMPPPHY YRLLFLNVCR 360
361 VVKQNSGLNG VAMNEKPTAI TPRFPDLIAI YNQLIEVARA QRTYRERIEK QKWQHRVEIE 420
421 WNKIFARIDF FFLFLFEMFN VLILVLFLRC AFLPVPPLPE NFSI
|
| Detection Method: |  |
| Confidence: | 77.0 |
| Match: | 2bg9A |
| Description: | Refined structure of the nicotinic acetylcholine receptor at 4A resolution. |
Matching Structure (courtesy of the PDB): |
|
