YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: cup-4

General Information:
Name(s) found: cup-4 / CE30416 [WormBase]
Description(s) found:
Found 22 descriptions.
SHOW ALL
  • WBGene00000845 locus:cup-4 Acetylcholine receptor-like protein cup-4 status:Confirmed UniProt:P34271 protein_id:CCD62529.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 433 amino acids

    Gene Ontology:
    Cellular Component: postsynaptic membrane [IEALink to PubMed article]
    membrane [IEALink to PubMed article]
    integral to membrane [IEALink to PubMed article]
    Biological Process: ion transport [IEALink to PubMed article]
    endocytosis [IMPLink to PubMed article]
    transport [IEALink to PubMed article]
    Molecular Function: extracellular ligand-gated ion channel activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIIIFVCFI LIFYLPIQKK HVNSQQQGID SDDGDAESFF NKSYSEHQSA LEQKIFRGYN  60
   61 PKNRPMKNAS FPTIVDVHWH IIHVSINQRE QTMTVHGHIY MRWFDEFLVW DPKDFNNIQY 120
  121 ARVKKWQVWQ PKIKVSNSAS GLGSAFDFST SAHVIIQMMG KDRAKVEMYP TFSIKVGCAF 180
  181 DFTDYPYDLN KCAINLFSTS TMADVQLQNL YAIPPTLSFG WEEQKMKRII SDFKIQNVSS 240
  241 SALYYTNGNI TSSAPITGFD LGSTWSMLAV TVSFVRHSPL FEAAVVTPCI VVASLISMTF 300
  301 FIDSLSSTFL LMMLHFYVQL IFLHDLVEKL PLSVSEIPFC IKLIGILMYT NGLTLVLHSS 360
  361 LLCGSYYKCP VPQQLNKIFV IEEYIPNTFK EKVQIKKEES NKSWRDLMKL IRPIIGFVLI 420
  421 ILLICMFFVC LLL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..433] PSI-BLAST 67.522879 Refined structure of the nicotinic acetylcholine receptor at 4A resolution.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle