| Protein: | cup-4 |
| Organism: | Caenorhabditis elegans |
| Length: | 433 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cup-4.
| Description | E-value | Query Range |
Subject Range |
|
|
313.0 | [0..31] | [412..53] |
|
Region A: Residues: [1-433] |
1 11 21 31 41 51
| | | | | |
1 MKIIIFVCFI LIFYLPIQKK HVNSQQQGID SDDGDAESFF NKSYSEHQSA LEQKIFRGYN 60
61 PKNRPMKNAS FPTIVDVHWH IIHVSINQRE QTMTVHGHIY MRWFDEFLVW DPKDFNNIQY 120
121 ARVKKWQVWQ PKIKVSNSAS GLGSAFDFST SAHVIIQMMG KDRAKVEMYP TFSIKVGCAF 180
181 DFTDYPYDLN KCAINLFSTS TMADVQLQNL YAIPPTLSFG WEEQKMKRII SDFKIQNVSS 240
241 SALYYTNGNI TSSAPITGFD LGSTWSMLAV TVSFVRHSPL FEAAVVTPCI VVASLISMTF 300
301 FIDSLSSTFL LMMLHFYVQL IFLHDLVEKL PLSVSEIPFC IKLIGILMYT NGLTLVLHSS 360
361 LLCGSYYKCP VPQQLNKIFV IEEYIPNTFK EKVQIKKEES NKSWRDLMKL IRPIIGFVLI 420
421 ILLICMFFVC LLL
|
| Detection Method: |  |
| Confidence: | 67.522879 |
| Match: | 2bg9A |
| Description: | Refined structure of the nicotinic acetylcholine receptor at 4A resolution. |
Matching Structure (courtesy of the PDB): |
|
