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Protein Overview: ife-3

General Information:
Name(s) found: ife-3 / CE30590 [WormBase]
Description(s) found:
Found 17 descriptions.
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  • WBGene00002061 locus:ife-3 Eukaryotic translation initiation factor 4E-3 status:Partially_confirmed UniProt:O61955 protein_id:CCD61788.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 250 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEALink to PubMed article]
    Biological Process: embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    translational initiation [IEALink to PubMed article]
    Molecular Function: translation initiation factor activity [IEALink to PubMed article]
    RNA binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTSVAENKA LSASGDVNAS DASVPPELLT RHPLQNRWAL WYLKADRNKE WEDCLKMVSL  60
   61 FDTVEDFWSL YNHIQSAGGL NWGSDYYLFK EGIKPMWEDV NNVQGGRWLV VVDKQLQRRT 120
  121 QLLDHYWLEL LMAIVGEQFD EYGDYICGAV VNVRQKGDKV SLWTRDATRD DVNLRIGQVL 180
  181 KQKLSIPDTE ILRYEVHKDS SARTSSTVKP RICLPAKDPA PVKEKGPAAT TSPSNPGTEA 240
  241 TGTSPATPTP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..250] PSI-BLAST 77.045757 Translation initiation factor eIF4e

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • translation initiation factor activity
    		•  12.6022960879923 bayes_pls_golite062009
  • RNA cap binding
    		•  8.70938037002519 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
    		•  7.91586572659635 bayes_pls_golite062009
  • translation regulator activity
    		•  7.87578736455963 bayes_pls_golite062009
  • RNA binding
    		•  6.31187636707846 bayes_pls_golite062009
  • binding
    		•  3.48071223822752 bayes_pls_golite062009
  • nucleic acid binding
    		•  3.46353214508261 bayes_pls_golite062009
  • protein binding
    		•  0.850113401405075 bayes_pls_golite062009
  • RNA 7-methylguanosine cap binding
    		•  0.544036568660606 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle