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Protein Overview: abi-1

General Information:
Name(s) found: abi-1 / CE29545 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00015146 locus:abi-1 status:Confirmed UniProt:Q10929 protein_id:CCD61521.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 469 amino acids

    Gene Ontology:
    Cellular Component: dendrite [IDA]
    cytoplasm [IEALink to PubMed article]
    neuronal cell body [IDA]
    axon [IDA]
    Biological Process: locomotory behavior [IMPLink to PubMed article]
    hermaphrodite genitalia development [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed articleLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed article]
    determination of adult lifespan [IMPLink to PubMed article]
    post-embryonic body morphogenesis [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    oviposition [IMPLink to PubMed article]
    gamete generation [IMPLink to PubMed article]
    growth [IMPLink to PubMed article]
    Molecular Function: protein kinase binding [IPI]
    protein N-terminus binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVNDLQELI ERRIPDNRAQ LETSHANLQQ VAAYCEDNYI QSNNKSAALE ESKKFAIQAL  60
   61 ASVAYQINKM VTDLHDMLAL QTDKVNSLTN QVQYVSQVVD VHKEKLARRE IGSLTTNKTL 120
  121 FKQPKIIAPA IPDEKQRYQR TPIDFSVLDG IGHGVRTSDP PRAAPISRAT SSISGSSPSQ 180
  181 FHNESPAYGV YAGERTATLG RTMRPYAPSI APSDYRLPQV TPQSESRIGR QMSHGSEFGD 240
  241 HMSGGGGSGS QHGSSDYNSI YQPDRYGTIR AGGRTTVDGS FSIPRLSSAQ SSAGGPESPT 300
  301 FPLPPPAMNY TGYVAPGSVV QQQQQQQMQQ QNYGTIRKST VNRHDLPPPP NSLLTGMSSR 360
  361 MPTQDDMDDL PPPPESVGGS SAYGVFAGRT ESYSSSQPPS LFDTSAGWMP NEYLEKVRVL 420
  421 YDYDAAKEDE LTLRENAIVY VLKKNDDDWY EGVLDGVTGL FPGNYVVPV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..84] deduced N/A No confident structure predictions are available.
    2 View Details [85..206] Pfam 53.920819 No description for PF07815.5 was found. No confident structure predictions are available.
    3 View Details [207..262] deduced N/A No confident structure predictions are available.
    4 View Details [263..469] PSI-BLAST 3.69897 NMR STRUCTURE OF THE TUMOR SUPPRESSOR BIN1: ALTERNATIVE SPLICING IN MELANOMA AND INTERACTION WITH C-MYC


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle