| Protein: | abi-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 469 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for abi-1.
| Description | E-value | Query Range |
Subject Range |
|
|
352.0 | [0..3] | [469..1] |
|
Region A: Residues: [1-84] |
1 11 21 31 41 51
| | | | | |
1 MSVNDLQELI ERRIPDNRAQ LETSHANLQQ VAAYCEDNYI QSNNKSAALE ESKKFAIQAL 60
61 ASVAYQINKM VTDLHDMLAL QTDK
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [85-206] |
1 11 21 31 41 51
| | | | | |
1 VNSLTNQVQY VSQVVDVHKE KLARREIGSL TTNKTLFKQP KIIAPAIPDE KQRYQRTPID 60
61 FSVLDGIGHG VRTSDPPRAA PISRATSSIS GSSPSQFHNE SPAYGVYAGE RTATLGRTMR 120
121 PY
|
| Detection Method: | |
| Confidence: | 53.920819 |
| Match: | PF07815.5 |
| Description: | No description for PF07815.5 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [207-262] |
1 11 21 31 41 51
| | | | | |
1 APSIAPSDYR LPQVTPQSES RIGRQMSHGS EFGDHMSGGG GSGSQHGSSD YNSIYQ
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [263-469] |
1 11 21 31 41 51
| | | | | |
1 PDRYGTIRAG GRTTVDGSFS IPRLSSAQSS AGGPESPTFP LPPPAMNYTG YVAPGSVVQQ 60
61 QQQQQMQQQN YGTIRKSTVN RHDLPPPPNS LLTGMSSRMP TQDDMDDLPP PPESVGGSSA 120
121 YGVFAGRTES YSSSQPPSLF DTSAGWMPNE YLEKVRVLYD YDAAKEDELT LRENAIVYVL 180
181 KKNDDDWYEG VLDGVTGLFP GNYVVPV
|
| Detection Method: | |
| Confidence: | 3.69897 |
| Match: | 1mv3A |
| Description: | NMR STRUCTURE OF THE TUMOR SUPPRESSOR BIN1: ALTERNATIVE SPLICING IN MELANOMA AND INTERACTION WITH C-MYC |
Matching Structure (courtesy of the PDB): |
|
