YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CE29286

General Information:
Name(s) found: CE29286 [WormBase]
Description(s) found:
SHOW ONLY BEST
  • WBGene00017798 status:Partially_confirmed UniProt:H2KYN8 protein_id:CCD64107.1 [WormBase]
  • gi|71991448|ref|NP_001023848.1| hypothetical protein F25G6.7 [Caenorhabditis elegans] [NCBI NR]
  • ref|NP_505203.1| solute carrier family 17 member (58.2 kD) (5J20) [Caenorhabditis elegans] [NCBI NR]
  • gi|15617804|gb|AAC25800.2| Hypothetical protein F25G6.7a [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE29286 WBGene00017798 sugar transporter status:Partially_confirmed TR:O16923 protein_id:AAC25800.2 [wormpep150.fasta]
  • 29286 WBGene00017798 sugar transporter status:Partially_confirmed TR:O16923 protein_id:AAC25800.2 [wormpep130-phg-ecoli-orf-rand.fasta]
  • solute carrier family 17 member (58.2 kD) (5J20) [Caenorhabditis elegans]gi|15617804|gb|AAC25800.2| Hypothetical protein F25G6.7a [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • sugar transporter status:Partially_confirmed TR:O16923 protein_id:AAC25800.2 [wormpep115.fasta.reversed]
  • CE29286 sugar transporter status:Partially_confirmed TR:O16923 protein_id:AAC25800.2 [wormpep80.hongbin]
  • CE29286 WBGene00017798 sugar transporter status:Partially_confirmed UniProt:O16923_CAEEL protein_id:AAC25800.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE29286 WBGene00017798 sugar transporter status:Partially_confirmed UniProt:O16923_CAEEL protein_id:AAC25800.2| [wormORF-contam.fasta]
  • Hypothetical protein F25G6.7a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • F25G6.7a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE29286 WBGene00017798 sugar transporter status:Partially_confirmed UniProt:O16923 protein_id:AAC25800.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE29286 WBGene00017798 sugar transporter status:Partially_confirmed UniProt:H2KYN8 protein_id:CCD64107.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE29286 WBGene00017798 locus:slc-17.8 status:Partially_confirmed UniProt:H2KYN8 protein_id:CCD64107.1 [wormpep246-ecoli-contam.fasta]
  • SLC (SoLute Carrier) homolog OS=Caenorhabditis elegans GN=slc-17.8 PE=4 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 527 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: inorganic anion transport [IEALink to PubMed article]
    drug transport [IEALink to PubMed article]
    glycerol-3-phosphate transport [IEALink to PubMed article]
    phosphate transport [IEALink to PubMed article]
    transport [IEALink to PubMed article]
    Molecular Function: inorganic anion transmembrane transporter activity [IEALink to PubMed article]
    phosphate transmembrane transporter activity [IEALink to PubMed article]
    glycerol-3-phosphate transmembrane transporter activity [IEALink to PubMed article]
    transporter activity [IEALink to PubMed article]
    drug transmembrane transporter activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVLMKNAVK INYDDAAKSP DQLLRSMSSV HPISDGIPSQ QRPLTYRWFP SWRFMTSIML  60
   61 CFCFGCVHLM NSNMGMAIVC MVNSSATYDN ETYPENAAPL LDWSSDEQGY IFSAFNAGLL 120
  121 VMLFTGGMAD KFNAKYMILV SVAIASLANF TLPWMAPISV YWAIFSRFLV GFADALLQPA 180
  181 MNSLITRWFP TSERSYALGL ATGGRQIGTL IIIPAAGALC SQTEIFGGWP SIFYLSGFIG 240
  241 VLFIFSYIFL GADKPSKQSC ISDNELKFIT ISNQSEDVGK KRTERKVPWK NILKSGAVWA 300
  301 SVISLVCHEF PLMTLIMFLP SYLHDVHHYH STENGILSAL PTVSLWFAKI GSSYLNTWLQ 360
  361 KNTTWKKDTI CKVLNSIGSI GLGVFLLAAT FLDNEHAWMA VLFLCLSMAS AGLHTPGCQL 420
  421 ALVSVAPAYS GAVTGFTFFF VAVSGIIHPI ITKMIVKDRT AAEWNLVFYI STVIAIFPII 480
  481 IFNVWGSTEV QWWAKSKASM QQEPNNKKMS KSSKASSSPS IDSIDMA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..527] PSI-BLAST 47.154902 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • substrate-specific transmembrane transporter activity
    		•  5.46247398538901 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  4.58978526526921 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  4.31967711223954 bayes_pls_golite062009
  • transporter activity
    		•  4.09176719149278 bayes_pls_golite062009
  • anion transmembrane transporter activity
    		•  3.94605227012838 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.59744164024479 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.5865018981083 bayes_pls_golite062009
  • inorganic anion transmembrane transporter activity
    		•  2.52916479889426 bayes_pls_golite062009
  • organic acid transmembrane transporter activity
    		•  2.15783210522667 bayes_pls_golite062009
  • phosphate transmembrane transporter activity
    		•  1.78662033436109 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.59419818573076 bayes_pls_golite062009
  • binding
    		•  1.26757615356623 bayes_pls_golite062009
  • secondary active transmembrane transporter activity
    		•  1.22264637452409 bayes_pls_golite062009
  • polyol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • alcohol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • glycerol transmembrane transporter activity
    		•  0.812001619402678 bayes_pls_golite062009
  • symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • solute:cation symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • cation:sugar symporter activity
    		•  0.143419068761182 bayes_pls_golite062009
  • sugar:hydrogen symporter activity
    		•  0.143419068761182 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle