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Protein Overview: rpt-4

General Information:
Name(s) found: rpt-4 / CE29280 [WormBase]
Description(s) found:
Found 22 descriptions.
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  • WBGene00004504 locus:rpt-4 Probable 26S protease regulatory subunit 10B status:Confirmed UniProt:O17071 protein_id:CCD62357.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 406 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    proteasome regulatory particle, base subcomplex [ISSLink to PubMed article]
    cytoplasm [IEALink to PubMed article]
    membrane [IEALink to PubMed article]
    Biological Process: DNA repair [IEALink to PubMed article]
    locomotion [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    protein catabolic process [IEALink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed article]
    post-embryonic body morphogenesis [IMPLink to PubMed article]
    protein transport [IEALink to PubMed article]
    DNA recombination [IEALink to PubMed article]
    reproduction [IMPLink to PubMed articleLink to PubMed article]
    Molecular Function: nucleotide binding [IEALink to PubMed article]
    ATPase activity [IEALink to PubMed article]
    ATP binding [IEALink to PubMed article]
    DNA binding [IEALink to PubMed article]
    protein binding [IEALink to PubMed article][IPILink to PubMed article]
    nucleoside-triphosphatase activity [IEALink to PubMed article]
    four-way junction helicase activity [IEALink to PubMed article]
    metalloendopeptidase activity [IEALink to PubMed article]
    hydrolase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLLQFSNMV EPTGPAIVED ERTKALNSYR RKLAECRDIE QKLKDLRKKE SEMTKQFDKS  60
   61 ENDIKSLQSV GQIVGEVLKQ LSEEKFIVKA TNGPRYVVGC RRSINKEELK QGTRVSLDMT 120
  121 TLTIMRQLPR EVDPLVYKMS HEDPGNISYS DVGGLAEQIR ELREVVELPL INPELFKRVG 180
  181 ITPPKGCLLF GPPGTGKTLL ARAVASQLDC NFLKVVSSAI VDKYIGESAR MIREMFNYAR 240
  241 DHQPCIVFMD EIDAIGGRRF SEGTSADREI QRTLMELLNQ LDGFDSLGKV KVIMATNRPD 300
  301 TLDPALLRPG RLDRKIEIGL PNEQSRLEIL KIHSNKITKH GEIDFEAVVK LSDGFSAADL 360
  361 RNVCTEAGMF AIRAEREFVI DEDFMKAVRK VGDAKRLETK LDYKPV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..406] PSI-BLAST 80.69897 VCP/p97


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle