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Protein Overview: bath-44

General Information:
Name(s) found: bath-44 / CE29072 [WormBase]
Description(s) found:
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  • WBGene00015567 locus:bath-44 status:Confirmed UniProt:H2KYJ3 protein_id:CCD63530.1 [WormBase]
  • gi|17531581|ref|NP_495549.1| BTB and MATH domain containing family member (bath-44) [Caenorhabditis elegans] [NCBI NR]
  • gi|15487555|gb|AAL00851.1|U13072_3 Hypothetical protein C07D10.2b [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE29072 WBGene00015567 locus:bath-44 status:Confirmed TR:Q95QX2 protein_id:AAL00851.1 [wormpep150.fasta]
  • 29072 WBGene00015567 status:Confirmed TR:Q95QX2 protein_id:AAL00851.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • speckle-type POZ protein (44.6 kD) (2H687) [Caenorhabditis elegans]gi|15487555|gb|AAL00851.1| Hypothetical protein C07D10.2b [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • CE29072 WBGene00015567 status:Confirmed TR:Q95QX2 protein_id:AAL00851.1 [wormpep132.fasta]
  • 29072 WBGene00015567 locus:bath-44 status:Confirmed TR:Q95QX2 protein_id:AAL00851.1 [wormpep150-phg-orf-ecoli-rand.fasta]
  • status:Partially_confirmed TR:Q95QX2 protein_id:AAL00851.1 [wormpep115.fasta.reversed]
  • CE29072 status:Partially_confirmed TR:Q95QX2 protein_id:AAL00851.1 [wormpep80.hongbin]
  • CE29072 WBGene00015567 locus:bath-44 status:Confirmed UniProt:Q95QX2_CAEEL protein_id:AAL00851.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE29072 WBGene00015567 locus:bath-44 status:Confirmed UniProt:Q95QX2_CAEEL protein_id:AAL00851.1| [wormORF-contam.fasta]
  • BTB and MATH domain containing family member (bath-44) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein C07D10.2b [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE29072 WBGene00015567 locus:bath-44 status:Confirmed UniProt:Q95QX2 protein_id:AAL00851.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE29072 WBGene00015567 locus:bath-44 status:Confirmed UniProt:H2KYJ3 protein_id:CCD63530.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • BTB and MATH domain containing OS=Caenorhabditis elegans GN=bath-44 PE=4 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 397 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: reproduction [IMPLink to PubMed article]
    Molecular Function: protein binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNSLMQMRH AADSWSTSEV RSLVHKHMWT IRGFSQLECR YLETSAKIKD ITKDESGLQV  60
   61 PLTHQPSSSG GLPELPDITF RIRLHPQGNK ESNKDFTFFQ CFTNQATTTT TPTFRAKFKF 120
  121 TVFNQRTEET PTTVYSGTQQ LHGYFEYIRR EVLVGHVQPA DDLILCLTIT ITFDTVTKAA 180
  181 QNTRSVPPEL PMPSDVTKDL ENLYRSGKHA DFTLVVEERE LKAHKAILAA RSPVFAAMME 240
  241 PHTAEAQNSR AILRDIDYEV VQAILYYIYT GTCTNMGGNA LDILAAAERF ALPGLKNIAE 300
  301 VAMRNGLATE TVCKNLAFAE MYGLVDFKKE AIKYICMNAN AVINSEGFLR LSRQNPDLIV 360
  361 DIMTVLVNER HNSPSCFSLD GTLEPASKRA RMTETNL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..180] PSI-BLAST 16.30103 Solution structure of N-terminal domain of speckle-type POZ protein
    2 View Details [181..318] PSI-BLAST 16.522879 No description for 2nn2A was found.
    3 View Details [319..397] PSI-BLAST 7.39794 No description for 2eqxA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  2.27961770997634 bayes_pls_golite062009
  • protein binding
    		•  1.74340583625887 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.31204855886285 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.07240204386411 bayes_pls_golite062009
  • DNA binding
    		•  0.996677220619186 bayes_pls_golite062009
  • catalytic activity
    		•  0.00622013180681097 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle