| Protein: | bath-44 |
| Organism: | Caenorhabditis elegans |
| Length: | 397 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for bath-44.
| Description | E-value | Query Range |
Subject Range |
|
|
255.0 | [0..1] | [397..14] |
|
Region A: Residues: [1-180] |
1 11 21 31 41 51
| | | | | |
1 MDNSLMQMRH AADSWSTSEV RSLVHKHMWT IRGFSQLECR YLETSAKIKD ITKDESGLQV 60
61 PLTHQPSSSG GLPELPDITF RIRLHPQGNK ESNKDFTFFQ CFTNQATTTT TPTFRAKFKF 120
121 TVFNQRTEET PTTVYSGTQQ LHGYFEYIRR EVLVGHVQPA DDLILCLTIT ITFDTVTKAA 180
181
|
| Detection Method: |  |
| Confidence: | 16.30103 |
| Match: | 2cr2A |
| Description: | Solution structure of N-terminal domain of speckle-type POZ protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.27961770997634 | bayes_pls_golite062009 |
| protein binding | 1.74340583625887 | bayes_pls_golite062009 |
| transcription regulator activity | 1.31204855886285 | bayes_pls_golite062009 |
| nucleic acid binding | 1.07240204386411 | bayes_pls_golite062009 |
| DNA binding | 0.996677220619186 | bayes_pls_golite062009 |
| catalytic activity | 0.00622013180681097 | bayes_pls_golite062009 |
|
Region A: Residues: [181-318] |
1 11 21 31 41 51
| | | | | |
1 QNTRSVPPEL PMPSDVTKDL ENLYRSGKHA DFTLVVEERE LKAHKAILAA RSPVFAAMME 60
61 PHTAEAQNSR AILRDIDYEV VQAILYYIYT GTCTNMGGNA LDILAAAERF ALPGLKNIAE 120
121 VAMRNGLATE TVCKNLAF
|
| Detection Method: | |
| Confidence: | 16.522879 |
| Match: | 2nn2A |
| Description: | No description for 2nn2A was found. |
|
Region A: Residues: [319-397] |
1 11 21 31 41 51
| | | | | |
1 AEMYGLVDFK KEAIKYICMN ANAVINSEGF LRLSRQNPDL IVDIMTVLVN ERHNSPSCFS 60
61 LDGTLEPASK RARMTETNL
|
| Detection Method: | |
| Confidence: | 7.39794 |
| Match: | 2eqxA |
| Description: | No description for 2eqxA was found. |
