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Protein Overview: nhr-100

General Information:
Name(s) found: nhr-100 / CE28893 [WormBase]
Description(s) found:
Found 23 descriptions.
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  • WBGene00003690 locus:nhr-100 Nuclear hormone receptor family member nhr-100 status:Confirmed UniProt:O17611 protein_id:CAB05126.3 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 437 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    Biological Process: regulation of transcription, DNA-dependent [IEALink to PubMed article]
    Molecular Function: transcription factor activity [IEALink to PubMed article]
    zinc ion binding [IEALink to PubMed article]
    steroid hormone receptor activity [IEALink to PubMed article]
    sequence-specific DNA binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNIPFNSVSK IQWRNPSPVS DTSCLVCGDP HGKRHYGAMS CNGCKGFFRR SIWEKRTYKC  60
   61 SFNNECIIEF KYRNRCRACR LKRCLHVGMD ANAVRSERTR KIKTEIDGDV KLEIKEEPAD 120
  121 SEDADDECPL DIKPDIAMAW QTKEIIAHML YEEDRVLNWE EPYNKLRYYT MDSEVLQAIK 180
  181 DPSQVCARTK INWNSHSRPL ITIEALRFNW CRTFTLTIDW FETLPEYRAL IDDDKELLVK 240
  241 FSLMPVGWLW YAYKSYEYRC DGIVFVDGSW FPRDKTIQQQ VCPTCVLYYG RITESFMADV 300
  301 VNSMKELEMD ETEMVLLKAI CHLQPDYRLT RRGNDVISTG REKYKRALCE YIRMKSNGFM 360
  361 DASFRLCKLM QILPVVDILG KYEDESALLV SLGETEFNGS GGGLPYDIHA SDSHFARKNR 420
  421 RKSDNQYHQQ HVPLHIQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..95] PSI-BLAST 24.69897 Human Liver Receptor Homologue DNA-Binding Domain (hLRH-1 DBD) in Complex with dsDNA from the hCYP7A1 Promoter
    2 View Details [96..437] PSI-BLAST 33.0 hemipteran ecdysone receptor ligand-binding domain complexed with ponasterone A


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle