| Protein: | nhr-100 |
| Organism: | Caenorhabditis elegans |
| Length: | 437 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for nhr-100.
| Description | E-value | Query Range |
Subject Range |
|
|
285.0 | [0..1] | [411..23] |
|
Region A: Residues: [1-95] |
1 11 21 31 41 51
| | | | | |
1 MNIPFNSVSK IQWRNPSPVS DTSCLVCGDP HGKRHYGAMS CNGCKGFFRR SIWEKRTYKC 60
61 SFNNECIIEF KYRNRCRACR LKRCLHVGMD ANAVR
|
| Detection Method: |  |
| Confidence: | 24.69897 |
| Match: | 2a66A |
| Description: | Human Liver Receptor Homologue DNA-Binding Domain (hLRH-1 DBD) in Complex with dsDNA from the hCYP7A1 Promoter |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [96-437] |
1 11 21 31 41 51
| | | | | |
1 SERTRKIKTE IDGDVKLEIK EEPADSEDAD DECPLDIKPD IAMAWQTKEI IAHMLYEEDR 60
61 VLNWEEPYNK LRYYTMDSEV LQAIKDPSQV CARTKINWNS HSRPLITIEA LRFNWCRTFT 120
121 LTIDWFETLP EYRALIDDDK ELLVKFSLMP VGWLWYAYKS YEYRCDGIVF VDGSWFPRDK 180
181 TIQQQVCPTC VLYYGRITES FMADVVNSMK ELEMDETEMV LLKAICHLQP DYRLTRRGND 240
241 VISTGREKYK RALCEYIRMK SNGFMDASFR LCKLMQILPV VDILGKYEDE SALLVSLGET 300
301 EFNGSGGGLP YDIHASDSHF ARKNRRKSDN QYHQQHVPLH IQ
|
| Detection Method: | |
| Confidence: | 33.0 |
| Match: | 1z5xE |
| Description: | hemipteran ecdysone receptor ligand-binding domain complexed with ponasterone A |
Matching Structure (courtesy of the PDB): |
|
