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Protein Overview: pept-2

General Information:
Name(s) found: pept-2 / CE28887 [WormBase]
Description(s) found:
Found 21 descriptions.
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  • WBGene00003876 locus:pept-2 Peptide transporter family 2 status:Confirmed UniProt:Q17758 protein_id:CAA94323.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 785 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    integral to membrane [IEALink to PubMed article]
    Biological Process: oligopeptide transport [IEALink to PubMed article]
    Molecular Function: oligopeptide transporter activity [IEALink to PubMed article]
    transporter activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGASHLHDDP RPGSPVDHQP TTWGGIIKKW PKQTFLIVGN ELCERFSFYG MRAVLTLYFF  60
   61 NILNFSQSFS TVLFHAFTVI CYSSPLLGSI LADGYIGKFW TIFFISIFYA CGQILLAFSS 120
  121 IAPSGSSHHP LLDLLGLLIV GLGTGGIKPC VSAFGGDQFP AHYTRMISLF FSMFYFSINA 180
  181 GSLISMWLTP YFRSMSCFGH DSCYPLAFGI PAILMIVATL VFMAGSFWYK KVPPKENIIF 240
  241 KVIGTITTAL RKKASSSSTH QRSHWLEYSL DGHDCALSTE CKNLHGNCAQ RRYIEDIKRL 300
  301 FRVIVMMIPV PMFWALYDQQ GSTWVLQAVG MDAKVFGFEI LPDQMGVLNA FLILFFIPIF 360
  361 QSIVYPTIEK LGFQMTMLRK MAGGGILTAV SFFVCGIVQL FVNPTLPYIP MANEAHLTII 420
  421 NTIPSCDFNV LIDSREPFDL LRKSGIAPDD SVRKPISFTG DDFFQPNITF DNLAPNCPKF 480
  481 TAEPMLAPAT SYVLTLSPNG WAYNAVRPEK PKSGKGELSM GLNLIVPCDK IPSNVTWEQC 540
  541 NGTEGYSGAI ALCKVESDVI TDNNNVCDPT AKGKFYVLSN ANPLDVHDFS KKSTVTAFGR 600
  601 TYSPIEMKPG TYRLFYTDDS RTHFTPLNLP PVQQDHMGGQ YLITVSTRSK NDSEVLATTE 660
  661 SLVSYNRVSI LWQIPQYVIL TAGEVLFSIT GLEFAYTEAS PQLKSVVQAL WLFTTAIGDL 720
  721 IVVVIFMLNI FSDVAVQMFV FGGIMLFVIF VFILLAVFYY EYADYSNESE VLTEKMIVDD 780
  781 DHTRI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..441] PSI-BLAST 12.09691 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
    2 View Details [442..507] deduced N/A No confident structure predictions are available.
    3 View Details [508..785] FFAS03 1.61 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transporter activity
    		•  4.09176719149278 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.59744164024479 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.5865018981083 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  3.54194478414824 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.21266150105753 bayes_pls_golite062009
  • organic acid transmembrane transporter activity
    		•  2.15783210522667 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  1.79369588808394 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.59419818573076 bayes_pls_golite062009
  • secondary active transmembrane transporter activity
    		•  1.22264637452409 bayes_pls_golite062009
  • binding
    		•  1.05701989682533 bayes_pls_golite062009
  • polyol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • alcohol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • glycerol transmembrane transporter activity
    		•  0.812001619402678 bayes_pls_golite062009
  • symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • solute:cation symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • cation:sugar symporter activity
    		•  0.143419068761182 bayes_pls_golite062009
  • sugar:hydrogen symporter activity
    		•  0.143419068761182 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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