| Protein: | pept-2 |
| Organism: | Caenorhabditis elegans |
| Length: | 785 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pept-2.
| Description | E-value | Query Range |
Subject Range |
|
|
317.0 | [0..1] | [785..1] |
|
Region A: Residues: [1-441] |
1 11 21 31 41 51
| | | | | |
1 MGASHLHDDP RPGSPVDHQP TTWGGIIKKW PKQTFLIVGN ELCERFSFYG MRAVLTLYFF 60
61 NILNFSQSFS TVLFHAFTVI CYSSPLLGSI LADGYIGKFW TIFFISIFYA CGQILLAFSS 120
121 IAPSGSSHHP LLDLLGLLIV GLGTGGIKPC VSAFGGDQFP AHYTRMISLF FSMFYFSINA 180
181 GSLISMWLTP YFRSMSCFGH DSCYPLAFGI PAILMIVATL VFMAGSFWYK KVPPKENIIF 240
241 KVIGTITTAL RKKASSSSTH QRSHWLEYSL DGHDCALSTE CKNLHGNCAQ RRYIEDIKRL 300
301 FRVIVMMIPV PMFWALYDQQ GSTWVLQAVG MDAKVFGFEI LPDQMGVLNA FLILFFIPIF 360
361 QSIVYPTIEK LGFQMTMLRK MAGGGILTAV SFFVCGIVQL FVNPTLPYIP MANEAHLTII 420
421 NTIPSCDFNV LIDSREPFDL L
|
| Detection Method: |  |
| Confidence: | 12.09691 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transporter activity | 4.09176719149278 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.59744164024479 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.5865018981083 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.54194478414824 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.21266150105753 | bayes_pls_golite062009 |
| organic acid transmembrane transporter activity | 2.15783210522667 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 1.79369588808394 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.59419818573076 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 1.22264637452409 | bayes_pls_golite062009 |
| binding | 1.05701989682533 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.812001619402678 | bayes_pls_golite062009 |
| symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| cation:sugar symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
| sugar:hydrogen symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
|
Region A: Residues: [442-507] |
1 11 21 31 41 51
| | | | | |
1 RKSGIAPDDS VRKPISFTGD DFFQPNITFD NLAPNCPKFT AEPMLAPATS YVLTLSPNGW 60
61 AYNAVR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [508-785] |
1 11 21 31 41 51
| | | | | |
1 PEKPKSGKGE LSMGLNLIVP CDKIPSNVTW EQCNGTEGYS GAIALCKVES DVITDNNNVC 60
61 DPTAKGKFYV LSNANPLDVH DFSKKSTVTA FGRTYSPIEM KPGTYRLFYT DDSRTHFTPL 120
121 NLPPVQQDHM GGQYLITVST RSKNDSEVLA TTESLVSYNR VSILWQIPQY VILTAGEVLF 180
181 SITGLEFAYT EASPQLKSVV QALWLFTTAI GDLIVVVIFM LNIFSDVAVQ MFVFGGIMLF 240
241 VIFVFILLAV FYYEYADYSN ESEVLTEKMI VDDDHTRI
|
| Detection Method: | |
| Confidence: | 1.61 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
| Matching Structure (courtesy of the PDB): |
|
