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Protein Overview: lgc-11

General Information:
Name(s) found: lgc-11 / CE28403 [WormBase]
Description(s) found:
Found 21 descriptions.
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  • WBGene00000061 locus:lgc-11 status:Confirmed UniProt:G5EGR1 protein_id:CCD71304.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 434 amino acids

    Gene Ontology:
    Cellular Component: postsynaptic membrane [IEALink to PubMed article]
    membrane [IEALink to PubMed article]
    integral to membrane [IEALink to PubMed article]
    Biological Process: ion transport [IEALink to PubMed article]
    transport [IEALink to PubMed article]
    Molecular Function: neurotransmitter receptor activity [IEALink to PubMed article]
    extracellular ligand-gated ion channel activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYYKISYLLS ISILLFFAKC EKVKNKAVEK KDDRNERELA KHLLDDYYQY TRPVRNYSSV  60
   61 LNVTVQPQIY NLVEVNEQNE QIKILLWFPQ SWKDDYLTWD PKEWNGIERI IIPKSQIWIP 120
  121 DGYIFNTVEE TEPLENHNAR VRYDGRVEVD FNKLVDLTCP MSVLSFPFDV QLCALQFGSW 180
  181 SYQAHAISFN VLDTFVPKKS KNSEWDIVSF NATKMTTKYG DTLGGFNVYE EIFYYLELRR 240
  241 KPLYYIVVIL LPSFLIVTVS NIGLFTPHGV HGDREEHVSL GLTTMLTMAV ILDMVTGQMP 300
  301 RSSEGIPLLG MYVLIEFVIS VIAVLVSVVI IFAHERMLYL DATPPYWVCK LFSDDCKMSL 360
  361 EEIEEDFCSK PADLVQELRF CMEEIKRYLD EQDSTEKNRI IWQRFFSWTD IIFSIFFFVV 420
  421 NCLVTFYMFM EFMF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..434] PSI-BLAST 74.69897 Refined structure of the nicotinic acetylcholine receptor at 4A resolution.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle