| Protein: | lgc-11 |
| Organism: | Caenorhabditis elegans |
| Length: | 434 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for lgc-11.
| Description | E-value | Query Range |
Subject Range |
|
|
347.0 | [0..17] | [434..185] |
|
Region A: Residues: [1-434] |
1 11 21 31 41 51
| | | | | |
1 MYYKISYLLS ISILLFFAKC EKVKNKAVEK KDDRNERELA KHLLDDYYQY TRPVRNYSSV 60
61 LNVTVQPQIY NLVEVNEQNE QIKILLWFPQ SWKDDYLTWD PKEWNGIERI IIPKSQIWIP 120
121 DGYIFNTVEE TEPLENHNAR VRYDGRVEVD FNKLVDLTCP MSVLSFPFDV QLCALQFGSW 180
181 SYQAHAISFN VLDTFVPKKS KNSEWDIVSF NATKMTTKYG DTLGGFNVYE EIFYYLELRR 240
241 KPLYYIVVIL LPSFLIVTVS NIGLFTPHGV HGDREEHVSL GLTTMLTMAV ILDMVTGQMP 300
301 RSSEGIPLLG MYVLIEFVIS VIAVLVSVVI IFAHERMLYL DATPPYWVCK LFSDDCKMSL 360
361 EEIEEDFCSK PADLVQELRF CMEEIKRYLD EQDSTEKNRI IWQRFFSWTD IIFSIFFFVV 420
421 NCLVTFYMFM EFMF
|
| Detection Method: |  |
| Confidence: | 74.69897 |
| Match: | 2bg9A |
| Description: | Refined structure of the nicotinic acetylcholine receptor at 4A resolution. |
Matching Structure (courtesy of the PDB): |
|
