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Protein Overview: mig-13

General Information:
Name(s) found: mig-13 / CE28324 [WormBase]
Description(s) found:
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  • WBGene00003245 locus:mig-13 status:Confirmed UniProt:G5EF33 protein_id:CCD67084.1 [WormBase]
  • gi|71990148|ref|NP_001024660.1| abnormal cell MIGration family member (mig-13) [Caenorhabditis elegans] [NCBI NR]
  • gi|5441308|gb|AAD43178.1| guidance protein MIG-13 [Caenorhabditis elegans] [NCBI NR]
  • ref|NP_508820.1| abnormal cell MIGration MIG-13, anterior-directed guidance protein, similar to tolloid/bone morphogenetic protein (40.1 kD) (mig-13) [Caenorhabditis elegans] [NCBI NR]
  • gi|14589813|gb|AAA81470.2| Abnormal cell migration protein 13, isoform a [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE28324 WBGene00003245 locus:mig-13 LDL-receptor class repeats\; C1R\/C1S-like repeats status:Confirmed TR:Q20360 protein_id:AAA81470.2 [wormpep150.fasta]
  • 28324 WBGene00003245 locus:mig-13 LDL-receptor class repeats\; C1R\/C1S-like repeats status:Confirmed TR:Q20360 protein_id:AAA81470.2 [wormpep130-phg-ecoli-orf-rand.fasta]
  • abnormal cell MIGration MIG-13, anterior-directed guidance protein, similar to tolloid/bone morphogenetic protein (40.1 kD) (mig-13) [Caenorhabditis elegans]gi|14589813|gb|AAA81470.2| Abnormal cell migration protein 13, isoform a [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • locus:mig-13 LDL-receptor class repeats\; C1R\/C1S-like repeats status:Confirmed TR:Q20360 protein_id:AAA81470.2 [wormpep115.fasta.reversed]
  • CE28324 locus:mig-13 LDL-receptor class repeats\; C1R\/C1S-like repeats status:Confirmed [wormpep80.hongbin]
  • CE28324 WBGene00003245 locus:mig-13 LDL-receptor class repeats\; C1R\/C1S-like repeats status:Confirmed UniProt:Q20360_CAEEL protein_id:AAA81470.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE28324 WBGene00003245 locus:mig-13 LDL-receptor class repeats\; C1R\/C1S-like repeats status:Confirmed UniProt:Q20360_CAEEL protein_id:AAA81470.2| [wormORF-contam.fasta]
  • abnormal cell MIGration family member (mig-13) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Abnormal cell migration protein 13, isoform a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • guidance protein MIG-13 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE28324 WBGene00003245 locus:mig-13 LDL-receptor class repeats\; C1R\/C1S-like repeats status:Confirmed UniProt:Q20360 protein_id:AAA81470.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE28324 WBGene00003245 locus:mig-13 LDL-receptor class repeats\; C1R\/C1S-like repeats status:Confirmed UniProt:G5EF33 protein_id:CCD67084.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE28324 WBGene00003245 locus:mig-13 status:Confirmed UniProt:G5EF33 protein_id:CCD67084.1 [wormpep246-ecoli-contam.fasta]
  • Guidance protein MIG-13 OS=Caenorhabditis elegans GN=mig-13 PE=2 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 362 amino acids

    Gene Ontology:
    Cellular Component: neuronal cell body [IDALink to PubMed article]
    plasma membrane [IDALink to PubMed article]
    axon [IDALink to PubMed article]
    Biological Process: positive regulation of cell migration [IMPLink to PubMed article]
    Molecular Function: molecular_function [NDLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKLLIALIL FSICWKPYSA EPIASFFDGL DSRNECKARL DRRLTGFSGL LYSHSKYGQE  60
   61 PYNTSRNCVL MLVAPIGYSI RVRALQFDVA STENARTCEK DTLHVFDHET TLDPESYAPA 120
  121 RIDDITSPGP IIGQFCGHFE NRILNTSSHN ALTLWWHSNP NGSNSKGFKL HWGSFRVSKT 180
  181 GNCVTGEFSC GNGECIPIES ACDRFADCSN GEDLIHSRQM AANCQNIELD PLTTVSGVFV 240
  241 LLFSATIILS LCGFIMFVCC LCKCLKSTIP IKGASSHTTT TTATDYKPDP PQFYPPSPPK 300
  301 MPPPSAASSY TPRLHHHFEG PLVPSETSAF HSSNRMQNHY SVNSDINGDY TYVRNDVHRN 360
  361 LL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..362] PSI-BLAST 46.221849 Low density lipoprotein (LDL) receptor YWTD domain; Low density lipoprotein (LDL) receptor, different EGF domains; Ligand-binding domain of low-density lipoprotein receptor

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • protein binding
    		•  2.30744405151563 bayes_pls_golite062009
  • receptor binding
    		•  1.70177010329948 bayes_pls_golite062009
  • binding
    		•  1.63967303762968 bayes_pls_golite062009
  • ErbB-2 class receptor binding
    		•  0.754940749066971 bayes_pls_golite062009
  • ErbB-3 class receptor binding
    		•  0.62427086336325 bayes_pls_golite062009
  • growth factor activity
    		•  0.59278308192712 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle