| Protein: | mig-13 |
| Organism: | Caenorhabditis elegans |
| Length: | 362 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mig-13.
| Description | E-value | Query Range |
Subject Range |
|
|
241.0 | [0..5] | [362..251] |
|
Region A: Residues: [1-362] |
1 11 21 31 41 51
| | | | | |
1 MTKLLIALIL FSICWKPYSA EPIASFFDGL DSRNECKARL DRRLTGFSGL LYSHSKYGQE 60
61 PYNTSRNCVL MLVAPIGYSI RVRALQFDVA STENARTCEK DTLHVFDHET TLDPESYAPA 120
121 RIDDITSPGP IIGQFCGHFE NRILNTSSHN ALTLWWHSNP NGSNSKGFKL HWGSFRVSKT 180
181 GNCVTGEFSC GNGECIPIES ACDRFADCSN GEDLIHSRQM AANCQNIELD PLTTVSGVFV 240
241 LLFSATIILS LCGFIMFVCC LCKCLKSTIP IKGASSHTTT TTATDYKPDP PQFYPPSPPK 300
301 MPPPSAASSY TPRLHHHFEG PLVPSETSAF HSSNRMQNHY SVNSDINGDY TYVRNDVHRN 360
361 LL
|
| Detection Method: |  |
| Confidence: | 46.221849 |
| Match: | 1n7dA |
| Description: | Low density lipoprotein (LDL) receptor YWTD domain; Low density lipoprotein (LDL) receptor, different EGF domains; Ligand-binding domain of low-density lipoprotein receptor |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein binding | 2.30744405151563 | bayes_pls_golite062009 |
| receptor binding | 1.70177010329948 | bayes_pls_golite062009 |
| binding | 1.63967303762968 | bayes_pls_golite062009 |
| ErbB-2 class receptor binding | 0.754940749066971 | bayes_pls_golite062009 |
| ErbB-3 class receptor binding | 0.62427086336325 | bayes_pls_golite062009 |
| growth factor activity | 0.59278308192712 | bayes_pls_golite062009 |
