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Protein Overview: CE28213

General Information:
Name(s) found: CE28213 [WormBase]
Description(s) found:
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  • WBGene00008238 status:Confirmed UniProt:Q95ZW9 protein_id:CAC42268.1 [WormBase]
  • gi|17558808|ref|NP_505461.1| hypothetical protein C50F4.16 [Caenorhabditis elegans] [NCBI NR]
  • gi|14530365|emb|CAC42268.1| C. elegans protein C50F4.16, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE28213 WBGene00008238 status:Partially_confirmed TR:Q95ZW9 protein_id:CAC42268.1 [wormpep150.fasta]
  • 28213 WBGene00008238 status:Partially_confirmed TR:Q95ZW9 protein_id:CAC42268.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • uridine diphosphate glucose pyrophosphatase (50.8 kD) (5K18) [Caenorhabditis elegans]gi|14530365|emb|CAC42268.1| Hypothetical protein C50F4.16 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed TR:Q95ZW9 protein_id:CAC42268.1 [wormpep115.fasta.reversed]
  • CE28213 status:Partially_confirmed TR:Q95ZW9 protein_id:CAC42268.1 [wormpep80.hongbin]
  • CE28213 WBGene00008238 status:Confirmed UniProt:Q95ZW9_CAEEL protein_id:CAC42268.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE28213 WBGene00008238 status:Confirmed UniProt:Q95ZW9_CAEEL protein_id:CAC42268.1| [wormORF-contam.fasta]
  • Hypothetical protein C50F4.16 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • C50F4.16 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE28213 WBGene00008238 status:Confirmed TR:Q95ZW9 protein_id:CAC42268.1 [WormBase_C-elegans_wp180_08-19-2007_reversed.fasta]
  • CE28213 WBGene00008238 status:Confirmed UniProt:Q95ZW9 protein_id:CAC42268.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • Uncharacterized protein OS=Caenorhabditis elegans GN=C50F4.16 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 450 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: metal ion binding [IEALink to PubMed article]
    hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [IEALink to PubMed article]
    hydrolase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTASKISDVS FVTDFVSKYQ KGMEMSYTLD GNSRVSEFNQ KMSSVSILLF HRDLEQFLLV  60
   61 RQFRPAIFTA SISNSPENHG KEFDKIDWSS YDSETGYTIE LCAGLIDKEG LSPREIASEE 120
  121 VAEECGYRVD PDDLIHVITF VVGAHQSGSA QHLYYAEIDE SMKISEGGGN VHEGEVITKV 180
  181 YYPVNVAREI ARPAIGTHAE VKGPPGVLFA FQWWFLVLDP KKKGLIATPP TGYQWQPHNV 240
  241 KTISNVKFNT DFDKKKYGYN PKRMIFTING ITRNWDLALC PNTATCILVD MVKKELIFLQ 300
  301 KLRAPVFVGK NRFLKENIGK PLDEIDFSNS DPKIAYTLEL VVNRVPDFDD PRKFARISVK 360
  361 QLGYDLPEDS FKLQAKCIPG IGQSGDTQSI FAVDVSKARL CEKEEDEDIE ELRVSFADLP 420
  421 SLYRQHNIGP PTTYYAIGFA LDQLLERDTL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..227] PSI-BLAST 29.30103 Structure of the MT-ADPRase in complex with ADPR, a Nudix enzyme
    2 View Details [228..450] PSI-BLAST 35.30103 Crystal structure of putative ADP ribose pyrophosphatase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.724329914463007 bayes_pls_golite062009
    2
    Term Confidence Notes
  • catalytic activity
    		•  0.724329914463007 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle