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View Structure Prediction Details

Protein: CE28213
Organism: Caenorhabditis elegans
Length: 450 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE28213.

Description E-value Query
Range
Subject
Range
gi|125774063, gi... - gi|54638026|gb|EAL27428.1| GA15978-PA [Drosophila pseudoobscura], gi|125774063|ref|XP_001358290.1| G...
252.0 [0..15] [443..3]

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Predicted Domain #1
Region A:
Residues: [1-227]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTASKISDVS FVTDFVSKYQ KGMEMSYTLD GNSRVSEFNQ KMSSVSILLF HRDLEQFLLV  60
   61 RQFRPAIFTA SISNSPENHG KEFDKIDWSS YDSETGYTIE LCAGLIDKEG LSPREIASEE 120
  121 VAEECGYRVD PDDLIHVITF VVGAHQSGSA QHLYYAEIDE SMKISEGGGN VHEGEVITKV 180
  181 YYPVNVAREI ARPAIGTHAE VKGPPGVLFA FQWWFLVLDP KKKGLIA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 29.30103
Match: 1mk1A
Description: Structure of the MT-ADPRase in complex with ADPR, a Nudix enzyme
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.724329914463007 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [228-450]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TPPTGYQWQP HNVKTISNVK FNTDFDKKKY GYNPKRMIFT INGITRNWDL ALCPNTATCI  60
   61 LVDMVKKELI FLQKLRAPVF VGKNRFLKEN IGKPLDEIDF SNSDPKIAYT LELVVNRVPD 120
  121 FDDPRKFARI SVKQLGYDLP EDSFKLQAKC IPGIGQSGDT QSIFAVDVSK ARLCEKEEDE 180
  181 DIEELRVSFA DLPSLYRQHN IGPPTTYYAI GFALDQLLER DTL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 35.30103
Match: 1viuA
Description: Crystal structure of putative ADP ribose pyrophosphatase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.724329914463007 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle