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Protein Overview: CE28010

General Information:
Name(s) found: CE28010 [WormBase]
Description(s) found:
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  • WBGene00017847 status:Partially_confirmed UniProt:Q9N5V0 protein_id:CCD63922.1 [WormBase]
  • gi|17553218|ref|NP_498448.1| hypothetical protein F27B3.5 [Caenorhabditis elegans] [NCBI NR]
  • gi|14574139|gb|AAF39793.2| Hypothetical protein F27B3.5 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE28010 WBGene00017847 status:Partially_confirmed TR:Q9N5V0 protein_id:AAF39793.2 [wormpep150.fasta]
  • 28010 WBGene00017847 status:Partially_confirmed TR:Q9N5V0 protein_id:AAF39793.2 [wormpep130-phg-ecoli-orf-rand.fasta]
  • putative protein family member, with 3 coiled coil-4 domains (3H644) [Caenorhabditis elegans]gi|14574139|gb|AAF39793.2| Hypothetical protein F27B3.5 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed TR:Q9N5V0 protein_id:AAF39793.2 [wormpep115.fasta.reversed]
  • CE28010 status:Partially_confirmed TR:Q9N5V0 protein_id:AAF39793.2 [wormpep80.hongbin]
  • CE28010 WBGene00017847 status:Partially_confirmed UniProt:Q9N5V0_CAEEL protein_id:AAF39793.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE28010 WBGene00017847 status:Partially_confirmed UniProt:Q9N5V0_CAEEL protein_id:AAF39793.2| [wormORF-contam.fasta]
  • Hypothetical protein F27B3.5 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • F27B3.5 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE28010 WBGene00017847 status:Partially_confirmed UniProt:Q9N5V0 protein_id:AAF39793.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE28010 WBGene00017847 status:Partially_confirmed UniProt:Q9N5V0 protein_id:CCD63922.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
    • Organism: Caenorhabditis elegans
    Length: 787 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: serine-type endopeptidase inhibitor activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWKIELSDWT DDEFKHIVDF FTNQNILQPL ETRRVRYLEM LLFNRSFMIF FPNIIDNHPE  60
   61 LFMPCKARPN PPDVPIAVRV FTFEDRKMVM RSELFKAINM KYPNRKPIEY NDVNGFLYAM 120
  121 ELKDVFKNFG DLWHDIDFLN TPINRTNQKA VPIITSTGDF CIPGFRAFSE IFYLMSLIMR 180
  181 VFQKVKINSM HVLDDYIKIL VSQLEPFLKS QCFITTDAFQ KIEQEMCNYW KKFENIPVKD 240
  241 IRDVKRFTLN DLKKELKYLG ITEAFPDVLV YADLAFPKLL ESVSQNKLET IDMFEAVAEC 300
  301 TYCCLLDKYL ELVQVWFPQF GSHKMFCSIL PPDPVDIFLG VSSSHKDLRR YIKGEDKENM 360
  361 KVKDTSNPQV MKNQRENPKS ISKPEGNNSD TPTESGNSSS SKVESSMANC TDCSGVRKEM 420
  421 KTVQNVLKDV QTQLTTMKHK SEKFEKNMTG SVERSKKAEQ RLQEEKLDHV KIQVEAKKKL 480
  481 ELKLEEVETW KKQVSALWNC KSDHEALNTK LSKCVEKGKK LKEINEKVSN SRDQLSTKVF 540
  541 ELKLQLNREL ETAETLKNER KDSAKLRNEV NQLKDQLERE REIAYGLQEE ASKLRVGTGK 600
  601 DVKRQILESE NAQLRQEKQR REMEKSSLLE TKMILSRQNE EQHKLIQSLM DQNHTEEGPS 660
  661 NHEDENGSYR KVLWKHQKIK DLYRKGEQQR EAEEMVNKLI SLNQHPEVQH ISFLELESFK 720
  721 KQISDYLHTV EKNIQKIKRN DDFTNLEPLP EPPKMSDKFM RLYWNEMNKQ PSTSDLPSAE 780
  781 LDDTDQL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..102] deduced N/A No confident structure predictions are available.
    2 View Details [103..460] PSI-BLAST 25.154902 Heavy meromyosin subfragment
    3 View Details [461..660] PSI-BLAST 10.0 Tropomyosin
    4 View Details [661..787] MSA 1.514991 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle