| Protein: | CE28010 |
| Organism: | Caenorhabditis elegans |
| Length: | 787 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE28010.
| Description | E-value | Query Range |
Subject Range |
|
|
319.0 | [0..162] | [785..2264] |
|
Region A: Residues: [1-102] |
1 11 21 31 41 51
| | | | | |
1 MWKIELSDWT DDEFKHIVDF FTNQNILQPL ETRRVRYLEM LLFNRSFMIF FPNIIDNHPE 60
61 LFMPCKARPN PPDVPIAVRV FTFEDRKMVM RSELFKAINM KY
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [103-460] |
1 11 21 31 41 51
| | | | | |
1 PNRKPIEYND VNGFLYAMEL KDVFKNFGDL WHDIDFLNTP INRTNQKAVP IITSTGDFCI 60
61 PGFRAFSEIF YLMSLIMRVF QKVKINSMHV LDDYIKILVS QLEPFLKSQC FITTDAFQKI 120
121 EQEMCNYWKK FENIPVKDIR DVKRFTLNDL KKELKYLGIT EAFPDVLVYA DLAFPKLLES 180
181 VSQNKLETID MFEAVAECTY CCLLDKYLEL VQVWFPQFGS HKMFCSILPP DPVDIFLGVS 240
241 SSHKDLRRYI KGEDKENMKV KDTSNPQVMK NQRENPKSIS KPEGNNSDTP TESGNSSSSK 300
301 VESSMANCTD CSGVRKEMKT VQNVLKDVQT QLTTMKHKSE KFEKNMTGSV ERSKKAEQ
|
| Detection Method: | |
| Confidence: | 25.154902 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [461-660] |
1 11 21 31 41 51
| | | | | |
1 RLQEEKLDHV KIQVEAKKKL ELKLEEVETW KKQVSALWNC KSDHEALNTK LSKCVEKGKK 60
61 LKEINEKVSN SRDQLSTKVF ELKLQLNREL ETAETLKNER KDSAKLRNEV NQLKDQLERE 120
121 REIAYGLQEE ASKLRVGTGK DVKRQILESE NAQLRQEKQR REMEKSSLLE TKMILSRQNE 180
181 EQHKLIQSLM DQNHTEEGPS
|
| Detection Method: | |
| Confidence: | 10.0 |
| Match: | 2tmaA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [661-787] |
1 11 21 31 41 51
| | | | | |
1 NHEDENGSYR KVLWKHQKIK DLYRKGEQQR EAEEMVNKLI SLNQHPEVQH ISFLELESFK 60
61 KQISDYLHTV EKNIQKIKRN DDFTNLEPLP EPPKMSDKFM RLYWNEMNKQ PSTSDLPSAE 120
121 LDDTDQL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
