YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: frm-4

General Information:
Name(s) found: frm-4 / CE27724 [WormBase]
Description(s) found:
SHOW ONLY BEST
  • WBGene00001491 locus:frm-4 status:Confirmed UniProt:Q95Q79 protein_id:CCD65427.1 [WormBase]
  • gi|17505679|ref|NP_491587.1| FERM domain (protein4.1-ezrin-radixin-moesin) family member (frm-4) [Caenorhabditis elegans] [NCBI NR]
  • gi|14573852|gb|AAK68201.1|U80443_6 Ferm domain (protein4.1-ezrin-radixin-moesin) family protein 4, isoform b, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE27724 WBGene00001491 locus:frm-4 status:Confirmed TR:Q95Q79 protein_id:AAK68201.1 [wormpep150.fasta]
  • 27724 WBGene00001491 locus:frm-4 status:Confirmed TR:Q95Q79 protein_id:AAK68201.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • FERM domain (protein 4.1-ezrin-radixin-moesin) (72.7 kD) (frm-4) [Caenorhabditis elegans]gi|14573852|gb|AAK68201.1| Ferm domain (protein4.1-ezrin-radixin-moesin) family protein 4, isoform b [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • locus:frm-4 status:Confirmed TR:Q95Q79 protein_id:AAK68201.1 [wormpep115.fasta.reversed]
  • CE27724 locus:frm-4 status:Confirmed [wormpep80.hongbin]
  • CE27724 WBGene00001491 locus:frm-4 status:Confirmed UniProt:Q95Q79_CAEEL protein_id:AAK68201.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE27724 WBGene00001491 locus:frm-4 status:Confirmed UniProt:Q95Q79_CAEEL protein_id:AAK68201.1| [wormORF-contam.fasta]
  • Ferm domain (protein4.1-ezrin-radixin-moesin) family protein 4, isoform b [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • FERM domain (protein4.1-ezrin-radixin-moesin) family member (frm-4) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE27724 WBGene00001491 locus:frm-4 status:Confirmed UniProt:Q95Q79 protein_id:AAK68201.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE27724 WBGene00001491 locus:frm-4 status:Confirmed UniProt:Q95Q79 protein_id:CCD65427.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Isoform of H2KYZ7, FERM domain (Protein4.1-ezrin-radixin-moesin) family OS=Caenorhabditis elegans GN=frm-4 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 643 amino acids

    Gene Ontology:
    Cellular Component: cytoskeleton [IEALink to PubMed article]
    Biological Process: protein amino acid dephosphorylation [IEALink to PubMed article]
    Molecular Function: protein tyrosine phosphatase activity [IEALink to PubMed article]
    cytoskeletal protein binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPQNNTSSSF LGRLTTSTRS SFMSPKDVRC NVHLLHDSDI IGNEFPRTQS AQTILDYVCQ  60
   61 LKHIQEKDFL GLRYQDHHKH RYWLDLTRSI NHVVKNFKKE IKKVGKTESM TLHLRFRYYP 120
  121 SDPARLRDPN LRYQLFVQLQ RDLLHGRLYC PTSSAAELAA LILQAQLGDY NEEKHVGNYV 180
  181 SGYKLLLKQT PKLEERIANN HKELKGKSSE SAELEFLEKA SQLDTYAFDP YTIKEPHDTL 240
  241 PVYIGASCKG ILIYTGQSRT HNIDWSELVK VDYSGKEIRL TLSENYRGQI TAAGTPTGTL 300
  301 NGHGPGSPSI MDKSLTKKPL TLKYTCPSGQ FAKHLWIHIL SQQAFFNETS AQDVKLKFSK 360
  361 PRIPLLSRGS TFRFPSKRVY REIEEEDSKS ILFDKSIMET SAVMNETTTS NENEESILNC 420
  421 STISAPLSSG SGVVRYDLLR QTPRVEQPWL KQNSLKVTTV HDNTASSSSS PDNSETQNNN 480
  481 LSKITNLNLS IEREVSTSPS TSPVPIVHTQ QHSDHNSQNL EKNGNGKLAN GGGSGVDLGK 540
  541 KTVHTNGTTL ICTEEKQDSI LSMDESLTSK SLISRIANTC FVFFLILLLI VAIVIVLFEK 600
  601 SEDSAHNDFI ESHRALSDLR HLYYEPTRHY VVEQYRKHFG AKI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..406] PSI-BLAST 75.0 No description for 2he7A was found.
    2 View Details [407..503] deduced N/A No confident structure predictions are available.
    3 View Details [504..643] PSI-BLAST 14.09691 Solution structure of PDZ domain of Protein tyrosine phosphatase, non-receptor type 4

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
    		•  0.566291652083235 bayes_pls_golite062009
  • protein binding
    		•  0.52823753548825 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle