YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: frm-4
Protein type: Transmembrane
Type Confidence: 0.91
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPQNNTSSSF LGRLTTSTRS SFMSPKDVRC NVHLLHDSDI IGNEFPRTQS AQTILDYVCQ  60
   61 LKHIQEKDFL GLRYQDHHKH RYWLDLTRSI NHVVKNFKKE IKKVGKTESM TLHLRFRYYP 120
  121 SDPARLRDPN LRYQLFVQLQ RDLLHGRLYC PTSSAAELAA LILQAQLGDY NEEKHVGNYV 180
  181 SGYKLLLKQT PKLEERIANN HKELKGKSSE SAELEFLEKA SQLDTYAFDP YTIKEPHDTL 240
  241 PVYIGASCKG ILIYTGQSRT HNIDWSELVK VDYSGKEIRL TLSENYRGQI TAAGTPTGTL 300
  301 NGHGPGSPSI MDKSLTKKPL TLKYTCPSGQ FAKHLWIHIL SQQAFFNETS AQDVKLKFSK 360
  361 PRIPLLSRGS TFRFPSKRVY REIEEEDSKS ILFDKSIMET SAVMNETTTS NENEESILNC 420
  421 STISAPLSSG SGVVRYDLLR QTPRVEQPWL KQNSLKVTTV HDNTASSSSS PDNSETQNNN 480
  481 LSKITNLNLS IEREVSTSPS TSPVPIVHTQ QHSDHNSQNL EKNGNGKLAN GGGSGVDLGK 540
  541 KTVHTNGTTL ICTEEKQDSI LSMDESLTSK SLISRIANTC FVFFLILLLI VAIVIVLFEK 600
  601 SEDSAHNDFI ESHRALSDLR HLYYEPTRHY VVEQYRKHFG AKI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle