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Protein Overview: fog-1

General Information:
Name(s) found: fog-1 / CE27479 [WormBase]
Description(s) found:
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  • WBGene00001481 locus:fog-1 status:Confirmed UniProt:Q95XX9 protein_id:CCD72821.1 [WormBase]
  • gi|71995469|ref|NP_001021791.1| Feminization Of Germline family member (fog-1) [Caenorhabditis elegans] [NCBI NR]
  • ref|NP_871827.1| feminization Of Germline FOG-1, Cytoplasmic Polyadenylation Element-Binding protein, required for specification of male germ cell fate (46.8 kD) (fog-1) [Caenorhabditis elegans] [NCBI NR]
  • ref|NP_871826.1| feminization Of Germline FOG-1, Cytoplasmic Polyadenylation Element-Binding protein, required for specification of male germ cell fate (46.8 kD) (fog-1) [Caenorhabditis elegans] [NCBI NR]
  • gi|14574396|gb|AAK68518.1|AC024810_13 Feminization of germline protein 1, isoform a [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE27479 WBGene00001481 locus:fog-1 status:Confirmed TR:Q95XX9 protein_id:AAK68518.1 [wormpep150.fasta]
  • 27479 WBGene00001481 locus:fog-1 status:Confirmed TR:Q95XX9 protein_id:AAK68518.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • feminization Of Germline FOG-1, Cytoplasmic Polyadenylation Element-Binding protein, required for specification of male germ cell fate (46.8 kD) (fog-1) [Caenorhabditis elegans]gi|32563919|ref|NP_871826.1| feminization Of Germline FOG-1, Cytoplasmic Poly [nrdb_11152004_Chlamydomonas]
  • locus:fog-1 status:Confirmed TR:Q95XX9 protein_id:AAK68518.1 [wormpep115.fasta.reversed]
  • CE27479 locus:fog-1 status:Confirmed [wormpep80.hongbin]
  • CE27479 WBGene00001481 locus:fog-1 status:Confirmed UniProt:Q95XX9_CAEEL protein_id:AAK68518.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE27479 WBGene00001481 locus:fog-1 status:Confirmed UniProt:Q95XX9_CAEEL protein_id:AAK68518.1| [wormORF-contam.fasta]
  • Feminization of germline protein 1, isoform a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Feminization Of Germline family member (fog-1) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE27479 WBGene00001481 locus:fog-1 status:Confirmed UniProt:Q95XX9 protein_id:AAK68518.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • CE27479 WBGene00001481 locus:fog-1 status:Confirmed UniProt:Q95XX9 protein_id:CCD72821.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Isoform of G5EBS6, Feminization Of Germline OS=Caenorhabditis elegans GN=fog-1 PE=4 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 405 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    intracellular [IEALink to PubMed article]
    Biological Process: spermatogenesis [IMPLink to PubMed article]
    germline cell cycle switching, mitotic to meiotic cell cycle [IMPLink to PubMed article]
    regulation of meiosis [IMPLink to PubMed article]
    germ-line sex determination [IMPLink to PubMed article]
    gamete generation [IMPLink to PubMed article]
    masculinization of hermaphrodite soma [IMPLink to PubMed article]
    masculinization of hermaphroditic germ-line [IMPLink to PubMed articleLink to PubMed article]
    Molecular Function: nucleic acid binding [IEALink to PubMed article]
    zinc ion binding [IEALink to PubMed article]
    mRNA 3'-UTR binding [TASLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMNRKIINKF FGQFGTVFVD WPVKQKPNSR GKSIAIGSYS YLFLVYSDEQ SVIKLMSACH  60
   61 RNSQNDFFVS VPGFRDMIQI RPWFIYNGFY ILEKARHNRI IDIHRTVFLG GLPRIVTAEE 120
  121 IAQMFSEFGV VLLVTIDIDQ DYGYPKGAAR VTFERDSAFN RALEKKFLKF DNIDSSKTMI 180
  181 EIKPYVMEDV GCDECGGLWF NPFLSIYDHL KCAKDDHQKE QKMAEIKNFN MWSSRSPFSL 240
  241 NSGDGHDDLI TKMDAGFKKN CNLACTYSNR ENEKNETEMG ARKFLEMVKS FGLEKEKTVT 300
  301 VNGNEYPIGP DLWDKFLPAP KYDVGTEPVR MNPEAKLQQF LRMKRTNVYS NKSAYCKEAP 360
  361 CRQYYCPSCS NKLHSGPNQH TLLPAGKPER RPRKDKNMYL VNMGK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..198] PSI-BLAST 36.0 Crystal Structure of UP1 Complexed With d(TTAGGGTTAG(6-MI)G); A Human Telomeric Repeat Containing 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine (6-MI)
    2 View Details [199..305] PSI-BLAST 31.0 Hu antigen C (Huc)
    3 View Details [306..405] PSI-BLAST 19.09691 No description for 2d9pA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle