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Protein Overview: CE27477

General Information:
Name(s) found: CE27477 [WormBase]
Description(s) found:
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  • WBGene00021615 status:Predicted UniProt:G5EGR7 protein_id:CCD73339.1 [WormBase]
  • gi|32566590|ref|NP_872265.1| hypothetical protein Y108F1.1 [Caenorhabditis elegans] [NCBI NR]
  • gi|23820811|gb|AAN01432.2| Hypothetical protein Y108F1.1 [Caenorhabditis elegans] [NCBI NR]
  • gi|17570397|ref|NP_508083.1| hypothetical protein Y47C4A.1 [Caenorhabditis elegans] [NCBI NR]
  • gi|15150693|gb|AAK85500.1|AC024789_1 Hypothetical protein Y47C4A.1 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE27477 WBGene00021615 status:Predicted TR:Q965V5 protein_id:AAK85500.1 [wormpep150.fasta]
  • CE27477 WBGene00022429 status:Predicted TR:Q965V5 protein_id:AAN01432.2 [wormpep150.fasta]
  • 27477 WBGene00021615 status:Predicted TR:Q965V5 protein_id:AAK85500.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • 27477 WBGene00022429 status:Predicted TR:Q965V5 protein_id:AAN01432.2 [wormpep130-phg-ecoli-orf-rand.fasta]
  • predicted CDS, AAA-type ATPase (XA897) [Caenorhabditis elegans]gi|17570397|ref|NP_508083.1| predicted CDS, AAA-type ATPase (XA900) [Caenorhabditis elegans]gi|23820811|gb|AAN01432.2| Hypothetical protein Y108F1.1 [Caenorhabditis elegans]gi|15150693|gb|A [nrdb_11152004_Chlamydomonas]
  • status:Predicted TR:Q965V5 protein_id:AAK85500.1 [wormpep115.fasta.reversed]
  • CE27477 status:Predicted TR:Q965V5 protein_id:AAK85500.1 [wormpep80.hongbin]
  • CE27477 WBGene00022429 status:Predicted UniProt:Q965V5_CAEEL protein_id:AAN01432.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE27477 WBGene00021615 status:Predicted UniProt:Q965V5_CAEEL protein_id:AAK85500.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE27477 WBGene00021615 status:Predicted UniProt:Q965V5_CAEEL protein_id:AAK85500.1| [wormORF-contam.fasta]
  • CE27477 WBGene00022429 status:Predicted UniProt:Q965V5_CAEEL protein_id:AAN01432.2| [wormORF-contam.fasta]
  • Y108F1.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein Y108F1.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Y47C4A.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein Y47C4A.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE27477 WBGene00022429 status:Predicted UniProt:Q965V5 protein_id:AAN01432.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE27477 WBGene00021615 status:Predicted UniProt:Q965V5 protein_id:AAK85500.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • CE27477 WBGene00022429 status:Predicted UniProt:G5EGR7 protein_id:CCD61180.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE27477 WBGene00021615 status:Predicted UniProt:G5EGR7 protein_id:CCD73339.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Uncharacterized protein OS=Caenorhabditis elegans GN=CELE_Y108F1.1 PE=4 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 238 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    Biological Process: protein catabolic process [IEALink to PubMed article]
    proteolysis [IEALink to PubMed article]
    Molecular Function: ATP binding [IEALink to PubMed article]
    metalloendopeptidase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGAPARFPR ISGVTVARKV RKHRDYSNPE TPNFTAQLFT IIVLGGLLLG GSGEEEQTLN  60
   61 QLLVEMDRMG SGNGAVVVLA STNRADVLDK ALLRPGRFDR HISIDLPTVL ERKDMFELYM 120
  121 RKIKLDHAPQ EYSQRLAVLT PSFTGADIMN VCNESAIRAA SNKCHVVTIK DMEYALDRVL 180
  181 AGSEKRSRSL VEEEREVVAY HEAGHALVGW MLEHTDALLK VLRGDSEKML KWKFSGEK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..238] PSI-BLAST 71.0 EDTA treated

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.470983068319171 bayes_pls_golite062009
  • hydrolase activity
    		•  0.0582794297634999 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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