YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE27477
Protein type:	Transmembrane
Type Confidence:	0.56
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGAPARFPR ISGVTVARKV RKHRDYSNPE TPNFTAQLFT IIVLGGLLLG GSGEEEQTLN  60
   61 QLLVEMDRMG SGNGAVVVLA STNRADVLDK ALLRPGRFDR HISIDLPTVL ERKDMFELYM 120
  121 RKIKLDHAPQ EYSQRLAVLT PSFTGADIMN VCNESAIRAA SNKCHVVTIK DMEYALDRVL 180
  181 AGSEKRSRSL VEEEREVVAY HEAGHALVGW MLEHTDALLK VLRGDSEKML KWKFSGEK

Type	Start	End	Confidence
Cytoplasmic	1	30	0.53
Transmembrane Helix	31	51	0.51
Non-Cytoplasmic	52	238	0.95