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Protein Overview: feh-1

General Information:
Name(s) found: feh-1 / CE27287 [WormBase]
Description(s) found:
Found 15 descriptions.
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  • WBGene00001410 locus:feh-1 status:Partially_confirmed UniProt:Q9BKZ9 protein_id:CCD73819.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 691 amino acids

    Gene Ontology:
    Cellular Component: actin filament [IDALink to PubMed article]
    ribosome [IEALink to PubMed article]
    intracellular [IEALink to PubMed article]
    Biological Process: embryonic development [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    feeding behavior [IMPLink to PubMed article]
    growth [IMPLink to PubMed article]
    translation [IEALink to PubMed article]
    Molecular Function: protein binding [IEALink to PubMed article]
    RNA binding [IEALink to PubMed article]
    structural constituent of ribosome [IEALink to PubMed article]
    beta-amyloid binding [IDALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFDFTPVYLL FSFIISSLQI IPVEEQCSKT CITLSLGTCK QQKKKKNLYS DLACRKNVDI  60
   61 FIIYVSFEKK KEIFLEFFHH VLQEEHDEYS AFKEAYEEEE SREYVIENGV KRLVNQHYDS 120
  121 RGYSSAGRGQ KGRREEERRR NMAVDYSSQD FRQSLAAIDQ ASRDGAISRG EDGVRVRQIG 180
  181 DTTIMTEHRD PYSFYWQLDQ ARREAESPPR RPPPTDYVID EEEEVLETVY SPEADDVMFE 240
  241 NQYRRPVRHP LPPPPPIMEE EPKDLPPGWE KHEDPQGYSY YWHVDSGTIQ RQPPPPVRDV 300
  301 TPARSPSPPP LPPPITTANR ETQADAPPPQ IIQLPPQQPV IEEHAFKQTT TKRRIEQDEM 360
  361 SEREIEDVAM IENGDTYHKP VRFAVRSLGW TDISEDELTA EKSSRAVNRA IVDLTTRSDI 420
  421 DSIPKWGDGR ELIMELDDNE LALLDPDSMN VIHSERIQAI RVWGVGRDNG RDFAYVSRDR 480
  481 GTRRFMCHVF RCDTSAKTIA NTLRDICKRL MLHRRPSSLH AIESGEKRIV RSEGLTAPID 540
  541 EPRKVIRCHF LGVTQVPKAT GIEILNEAVD RLVSQVRSER WILADVSIAP STIAIVEVNG 600
  601 QQIAECRVRY LSFLGIGRDV KHCAFIMQTS SESFMCYVFH VEPNAAAMAK MVEAACKLRY 660
  661 QKVLDAHSSS RHHSGMSIHG QHPPSTYHGM D

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..123] deduced N/A No confident structure predictions are available.
    2 View Details [124..251] deduced N/A No confident structure predictions are available.
    3 View Details [252..391] PSI-BLAST 10.30103 No description for 2f21A was found.
    4 View Details [392..448] PSI-BLAST 9.522879 NMR structure of WW domains (WW3-4) from Suppressor of Deltex
    5 View Details [449..529] FFAS03 2.0 Crystal structure of the phosphotyrosine binding domain(PTB) of mouse Disabled 2(Dab2):implications for Reeling signaling
    6 View Details [530..691] PSI-BLAST 35.221849 Solution Structure of the C-terminal Phosphotyrosine Interaction Domain of APBB2 from Mouse

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4
    Term Confidence Notes
  • binding
    		•  0.845797520024653 bayes_pls_golite062009
  • protein binding
    		•  0.773483173957116 bayes_pls_golite062009
    5 No functions predicted.
    6
    Term Confidence Notes
  • binding
    		•  1.5144141194236 bayes_pls_golite062009
  • protein binding
    		•  1.42613583294271 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.73

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle