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Protein Overview: ddx-23

General Information:
Name(s) found: ddx-23 / CE26887 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00017162 locus:ddx-23 status:Confirmed UniProt:Q95QN2 protein_id:CCD65989.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 730 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: DNA repair [IEALink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed article]
    DNA recombination [IEALink to PubMed article]
    Molecular Function: nucleic acid binding [IEALink to PubMed article]
    ATP binding [IEALink to PubMed article]
    ATP-dependent helicase activity [IEALink to PubMed article]
    helicase activity [IEALink to PubMed article]
    ATP-dependent DNA helicase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAEPPSLEE LLEKKKREED ELAKPKFLSK AERAALALKR REEEVAKLRE TQKQAEEARK  60
   61 NWGRTEKTSD DRRDRGLDRG NDRDRDRERE RDRDRRRDRR ERSGSRDRRR RSRSRDRDGG 120
  121 RRRDRSRSRD RRDRNDDRKR DRNEDSDNEE DVSKMADAVK DRYLGKQKEK KKRGRRLHEK 180
  181 KFVFDWDAGE DTSQDYNKLY QSRHEIQFFG RGSVAGTDVN AQKKEKNSFY QEMMENRRTV 240
  241 DEKEQEMHRL EKELKKEKKV AHDDRHWRMK ELSEMSDRDW RIFREDFNIS IKGGRVPRPL 300
  301 RNWEEAGFPD EVYQAVKEIG YLEPTPIQRQ AIPIGLQNRD VIGVAETGSG KTAAFLLPLL 360
  361 VWITSLPKME RQEHRDLGPY AIIMAPTREL AQQIEEETNK FGKLLGIKTV SVIGGASRED 420
  421 QGMKLRMGVE VVIATPGRLL DVLENRYLLL NQCTYVILDE ADRMLDMGFE PDVQKVLEYM 480
  481 PDTNMKKDTD EFDNEEALMK GFSTREKYRQ TVMFTATMSS AIERLARQYL RRPAVVHIGS 540
  541 AGKPTERVEQ VVYMVPEDRK RKKLVEVLES QFQPPIIIFV NQKKGADMLS KGLTKLGFKP 600
  601 TVLHGGKGQD QREYALQALK EGTSDILVAT DVAGRGIDVK DVSLVLNYDM AKSIEDYTHR 660
  661 IGRTGRAGKH GKAITFLTPD DTAVYFDLKQ VLVESPVSSC PPELANHPDA QSKPGVFTSK 720
  721 KRQDETLFLK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..229] FFAS03 1.09 BRCA2 helical domain; BRCA2 tower domain; OB-fold domains of BRCA2
    2 View Details [230..730] PSI-BLAST 102.0 No description for 2db3A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle