| Protein: | ddx-23 |
| Organism: | Caenorhabditis elegans |
| Length: | 730 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ddx-23.
| Description | E-value | Query Range |
Subject Range |
|
|
473.0 | [0..5] | [729..119] |
|
Region A: Residues: [1-229] |
1 11 21 31 41 51
| | | | | |
1 MAAEPPSLEE LLEKKKREED ELAKPKFLSK AERAALALKR REEEVAKLRE TQKQAEEARK 60
61 NWGRTEKTSD DRRDRGLDRG NDRDRDRERE RDRDRRRDRR ERSGSRDRRR RSRSRDRDGG 120
121 RRRDRSRSRD RRDRNDDRKR DRNEDSDNEE DVSKMADAVK DRYLGKQKEK KKRGRRLHEK 180
181 KFVFDWDAGE DTSQDYNKLY QSRHEIQFFG RGSVAGTDVN AQKKEKNSF
|
| Detection Method: |  |
| Confidence: | 1.09 |
| Match: | 1miuA |
| Description: | BRCA2 helical domain; BRCA2 tower domain; OB-fold domains of BRCA2 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [230-730] |
1 11 21 31 41 51
| | | | | |
1 YQEMMENRRT VDEKEQEMHR LEKELKKEKK VAHDDRHWRM KELSEMSDRD WRIFREDFNI 60
61 SIKGGRVPRP LRNWEEAGFP DEVYQAVKEI GYLEPTPIQR QAIPIGLQNR DVIGVAETGS 120
121 GKTAAFLLPL LVWITSLPKM ERQEHRDLGP YAIIMAPTRE LAQQIEEETN KFGKLLGIKT 180
181 VSVIGGASRE DQGMKLRMGV EVVIATPGRL LDVLENRYLL LNQCTYVILD EADRMLDMGF 240
241 EPDVQKVLEY MPDTNMKKDT DEFDNEEALM KGFSTREKYR QTVMFTATMS SAIERLARQY 300
301 LRRPAVVHIG SAGKPTERVE QVVYMVPEDR KRKKLVEVLE SQFQPPIIIF VNQKKGADML 360
361 SKGLTKLGFK PTVLHGGKGQ DQREYALQAL KEGTSDILVA TDVAGRGIDV KDVSLVLNYD 420
421 MAKSIEDYTH RIGRTGRAGK HGKAITFLTP DDTAVYFDLK QVLVESPVSS CPPELANHPD 480
481 AQSKPGVFTS KKRQDETLFL K
|
| Detection Method: | |
| Confidence: | 102.0 |
| Match: | 2db3A |
| Description: | No description for 2db3A was found. |
