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Protein Overview: CE26815

General Information:
Name(s) found: CE26815 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00010089 locus:hpo-31 status:Confirmed UniProt:Q93795 protein_id:CAB02125.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 436 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: nematode larval development [IMPLink to PubMed article]
    RNA processing [IEALink to PubMed article]
    tRNA 3'-terminal CCA addition [IEALink to PubMed article]
    mRNA polyadenylation [IEALink to PubMed article]
    growth [IMPLink to PubMed article]
    Molecular Function: tRNA adenylyltransferase activity [IEALink to PubMed article]
    ATP binding [IEALink to PubMed article]
    nucleotidyltransferase activity [IEALink to PubMed article]
    RNA binding [IEALink to PubMed article]
    polynucleotide adenylyltransferase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNQIEPTTMK IDNEDFRTLF TPQLLKLRDL FAKRNYELRI AGGAVRDLLM NIRPADVDFA  60
   61 STATPTQMKE MFEEDKIRML HKRGEEHGTI TCRIDDCENF EITTLRVDIV CDGRRAQVEY 120
  121 TTDWQLDANR RDLTINSLFL DLHGNVVDYF GGIRDIETRR IAFVGDARQR IQEDYLRILR 180
  181 YFRFFGRISD CTEHEHDTIQ AIVENKDGMA GISAERIWTE LKKIVVGRMA DEVLKAMIEQ 240
  241 CELQKYLGLP KECNLERFHT VFNRFSKTVE PMTMIACLCE DEHQIAEFHR ITKLSNDERL 300
  301 LGEFILSERQ SAVENLKNDD WWIDRIVDLE VRPGHENQQD RLRQRLVQLA KSVLADEERI 360
  361 QMIENFEAPK FPITGRDLME AGVRKGPHVR NVLYYLYNLW KESRFTESKY SLLERAKDSD 420
  421 IPDLSKERRK SISPKR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..436] PSI-BLAST 87.39794 tRNA CCA-adding enzyme, C-terminal domains; tRNA CCA-adding enzyme, head domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • tRNA binding
    		•  1.96218336722441 bayes_pls_golite062009
  • nucleotidyltransferase activity
    		•  1.28424599869932 bayes_pls_golite062009
  • RNA binding
    		•  1.26469116227089 bayes_pls_golite062009
  • tRNA nucleotidyltransferase activity
    		•  1.05100814747368 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.909120817238637 bayes_pls_golite062009
  • binding
    		•  0.903714723880344 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.85021422477192 bayes_pls_golite062009
  • catalytic activity
    		•  0.75232920999699 bayes_pls_golite062009
  • polynucleotide adenylyltransferase activity
    		•  0.747086661208511 bayes_pls_golite062009
  • transferase activity
    		•  0.432029324907561 bayes_pls_golite062009
  • DNA binding
    		•  0.329185456594284 bayes_pls_golite062009
  • protein binding
    		•  0.140876926470268 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle