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View Structure Prediction Details

Protein: CE26815
Organism: Caenorhabditis elegans
Length: 436 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE26815.

Description E-value Query
Range
Subject
Range
gi|157759702 - gi|157759702|ref|XP_001672193.1| Hypothetical protein CBG11474 [Caenorhabditis briggsae AF16]
gi|187030286, gi... - gi|39590491|emb|CAE66231.1| Hypothetical protein CBG11474 [Caenorhabditis briggsae], gi|187030286|em...
337.0 [0..1] [433..30]

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Predicted Domain #1
Region A:
Residues: [1-436]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNQIEPTTMK IDNEDFRTLF TPQLLKLRDL FAKRNYELRI AGGAVRDLLM NIRPADVDFA  60
   61 STATPTQMKE MFEEDKIRML HKRGEEHGTI TCRIDDCENF EITTLRVDIV CDGRRAQVEY 120
  121 TTDWQLDANR RDLTINSLFL DLHGNVVDYF GGIRDIETRR IAFVGDARQR IQEDYLRILR 180
  181 YFRFFGRISD CTEHEHDTIQ AIVENKDGMA GISAERIWTE LKKIVVGRMA DEVLKAMIEQ 240
  241 CELQKYLGLP KECNLERFHT VFNRFSKTVE PMTMIACLCE DEHQIAEFHR ITKLSNDERL 300
  301 LGEFILSERQ SAVENLKNDD WWIDRIVDLE VRPGHENQQD RLRQRLVQLA KSVLADEERI 360
  361 QMIENFEAPK FPITGRDLME AGVRKGPHVR NVLYYLYNLW KESRFTESKY SLLERAKDSD 420
  421 IPDLSKERRK SISPKR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 87.39794
Match: 1ou5A
Description: tRNA CCA-adding enzyme, C-terminal domains; tRNA CCA-adding enzyme, head domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
tRNA binding 1.96218336722441 bayes_pls_golite062009
nucleotidyltransferase activity 1.28424599869932 bayes_pls_golite062009
RNA binding 1.26469116227089 bayes_pls_golite062009
tRNA nucleotidyltransferase activity 1.05100814747368 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.909120817238637 bayes_pls_golite062009
binding 0.903714723880344 bayes_pls_golite062009
nucleic acid binding 0.85021422477192 bayes_pls_golite062009
catalytic activity 0.75232920999699 bayes_pls_golite062009
polynucleotide adenylyltransferase activity 0.747086661208511 bayes_pls_golite062009
transferase activity 0.432029324907561 bayes_pls_golite062009
DNA binding 0.329185456594284 bayes_pls_golite062009
protein binding 0.140876926470268 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle