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Protein Overview: CE26547

General Information:
Name(s) found: CE26547 [WormBase]
Description(s) found:
Found 17 descriptions.
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  • WBGene00021748 status:Partially_confirmed UniProt:Q965Q9 protein_id:CCD72441.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 605 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    cytoplasm [IEALink to PubMed article]
    Biological Process: mRNA processing [IEALink to PubMed article]
    spliceosome assembly [IEALink to PubMed article]
    Molecular Function: nucleic acid binding [IEALink to PubMed article]
    RNA binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDQLRKDGWY INESQTSQLF DDELLPKNGS EIEKVILNED LRNFGEASII NLLKKEDFVF  60
   61 EGPCVLQLLR YRNVSVPRIK EELNQTDPAH SIIRLFFTDG HSSISALLLQ SIPGITSDTP 120
  121 PGTKILILGK VDVEGGFLIL GKKDIRILGG KVDEMIEKWN VEKSSVRAGG FKSSVGKGTG 180
  181 APKWISFGKR GQKGQLEKGF KANSVMPKTQ KEGEDADDDF SKNRAEILKD LDSDTAKTFA 240
  241 KPNLAPPPVK APAPPKERRV PAARPARKGR GRKNSEDGPD VDVGEYANHK PSGPATLFDF 300
  301 IGGGAGAGAS EKAVELLPPQ NVQHLTEKMG KLNVKNSENF KYPGAGGRRD QRPAAARDDN 360
  361 RGPKNSAPQN QRPAAARDGN RGPKNPGPQN RAADYFRDRD RQQRPSTGSV GQQPREVSRN 420
  421 FQNSPRSFNQ NSNQGHPRGN QKSFQQGAPH QTPRGNQGNF QQQGPPRGTG NYFFQQGPPR 480
  481 GGQFHGGSQQ GPPPPPPSQH HPRGFQQQAQ QNPPPRGNNQ GQSYHGAPRG MGNFGHQEPR 540
  541 NVQQSHQQQT GGPQWRVGAQ CLATWTDGNL YPATVTELLP NRTAIVRYNE YGNMHTIPVD 600
  601 FLIIP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..159] Pfam 18.346787 No description for PF08585.3 was found. No confident structure predictions are available.
    2 View Details [160..539] PSI-BLAST 34.522879 No description for 1y0fB was found.
    3 View Details [540..605] FFAS03 3.56 No description for 2o4xB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle