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Protein Overview: hil-2

General Information:
Name(s) found: hil-2 / CE26293 [WormBase]
Description(s) found:
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  • WBGene00001853 locus:hil-2 histone H1.2 status:Partially_confirmed UniProt:P15796 protein_id:CCD74158.1 [WormBase]
  • gi|71999558|ref|NP_741417.3| HIstone H1 Like family member (hil-2) [Caenorhabditis elegans] [NCBI NR]
  • gi|21240753|gb|AAM44399.1|AC084197_37 Histone h1 like protein 2, isoform a, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE26293 WBGene00001853 locus:hil-2 histone H1.2 status:Partially_confirmed [wormpep150.fasta]
  • 26293 WBGene00001853 locus:hil-2 histone H1.2 status:Partially_confirmed TR:Q8MXR7 protein_id:AAM44399.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • Histone h1 like protein 2, isoform a [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • CE26293 WBGene00001853 locus:hil-2 histone H1.2 status:Partially_confirmed TR:Q8MXR7 protein_id:AAM44399.1 [wormpep132.fasta]
  • 26293 WBGene00001853 locus:hil-2 histone H1.2 status:Partially_confirmed [wormpep150-phg-orf-ecoli-rand.fasta]
  • locus:hil-2 histone H1.2 status:Partially_confirmed TR:Q8MXR7 protein_id:AAM44399.1 [wormpep115.fasta.reversed]
  • CE26293 status:Partially_confirmed protein_id:AAM44399.1 [wormpep80.hongbin]
  • CE26293 WBGene00001853 locus:hil-2 histone H1.2 status:Partially_confirmed UniProt:P15796 protein_id:AAM44399.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE26293 WBGene00001853 locus:hil-2 histone H1.2 status:Partially_confirmed UniProt:P15796 protein_id:AAM44399.1| [wormORF-contam.fasta]
  • HIstone H1 Like family member (hil-2) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
    • Organism: Caenorhabditis elegans
    Length: 241 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    nucleosome [IEALink to PubMed article]
    Biological Process: nucleosome assembly [IEALink to PubMed article]
    Molecular Function: DNA binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPFPFSRLFS FGVEHETGYV SRQSGRGRVY KGGGYSPFTI TFQVSTHRST MSDVTVAETP  60
   61 AVKTPTKAPK APKSKTTKEP KAKVAAAHPP FINMVTAAIS SLKERKGSSK IAILKYITAN 120
  121 YKVGDQLTKI NSRLRAALNK GVASKALVQS VGNGASGRFR VAEKAAATKK PVAKKPVAKK 180
  181 AATGEKKAKK TTVAKKTGDK VKKAKSPKKI AKPAAKKVAK SPAKKAAPKK APAKKAAAPK 240
  241 A

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..84] deduced N/A No confident structure predictions are available.
    2 View Details [85..241] PSI-BLAST 7.221849 Histone H5, globular domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.835523092977445 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.4843036104266 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.37117756729668 bayes_pls_golite062009
  • DNA binding
    		•  0.3118855114645 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle