YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: lim-4

General Information:
Name(s) found: lim-4 / CE25675 [WormBase]
Description(s) found:
Found 20 descriptions.
SHOW ALL
  • WBGene00002987 locus:lim-4 status:Confirmed UniProt:G5EEA1 protein_id:CCD71434.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 355 amino acids

    Gene Ontology:
    Cellular Component: cell [IDALink to PubMed article]
    nucleus [IEALink to PubMed article]
    Biological Process: regulation of transcription, DNA-dependent [IDALink to PubMed article][IEALink to PubMed article]
    cell fate specification [IMPLink to PubMed article]
    Molecular Function: transcription factor activity [IEALink to PubMed article][ISSLink to PubMed article]
    zinc ion binding [IEALink to PubMed article]
    sequence-specific DNA binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDAHLVQAKK TSTASELSDS SLTFPFIGDY LSSPSLTTSD YVSDCSNLTV EGPVPANQEF  60
   61 SSSDESSVYI SSALRLADYA FTPDDNIRIK PDAVIVICTQ CQHQIQDKFF LSIDGRNYHE 120
  121 NCLQCSTCEN PLSNKCFYKD KTFYCKGCYF RTHVTSTASS CRELGPKCAS CDRTIQATDW 180
  181 VRRARNYVYH LACFSCNQCK RQLSTGEEYA LQEGNLLCKQ HFLELVEGDS GVSSQKAKTK 240
  241 RVRTTFAEDQ LSVLQTYFNR DSNPDGADLE KIASMTGLSK RVTQVWFQNS RARQKKWHQK 300
  301 SEGDNGDSQR SSVGPSSPSQ KSDSSSEMMY PTSVTTSVED AIPDSIVILG SLQFD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..222] PSI-BLAST 24.0 No description for 2i13A was found.
    2 View Details [223..355] PSI-BLAST 3.69897 No description for 2dmqA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle