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Protein Overview: fat-3

General Information:
Name(s) found: fat-3 / CE25153 [WormBase]
Description(s) found:
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  • WBGene00001395 locus:fat-3 Delta(6)-fatty-acid desaturase fat-3 status:Confirmed UniProt:Q23221 protein_id:CAA94233.2 [WormBase]
  • gi|6434321|emb|CAA94233.2| C. elegans protein W08D2.4, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17542820|ref|NP_501752.1| FATty acid desaturase family member (fat-3) [Caenorhabditis elegans] [NCBI NR]
  • Delta(6)-fatty-acid desaturase fat-3 OS=Caenorhabditis elegans GN=fat-3 PE=2 SV=2 [Swiss-Prot]
  • [wormpep67.fasta]
  • CE25153 WBGene00001395 locus:fat-3 status:Confirmed TR:Q23221 protein_id:CAA94233.2 [wormpep150.fasta]
  • 25153 WBGene00001395 locus:fat-3 status:Confirmed TR:Q23221 protein_id:CAA94233.2 [wormpep130-phg-ecoli-orf-rand.fasta]
  • fatty acid desaturase (51.8 kD) (fat-3) [Caenorhabditis elegans]gi|6434321|emb|CAA94233.2| Hypothetical protein W08D2.4 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • locus:fat-3 status:Confirmed TR:Q23221 protein_id:CAA94233.2 [wormpep115.fasta.reversed]
  • CE25153 locus:fat-3 status:Confirmed TR:Q23221 protein_id:CAA94233.2 [wormpep80.hongbin]
  • CE25153 WBGene00001395 locus:fat-3 status:Confirmed UniProt:Q23221_CAEEL protein_id:CAA94233.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE25153 WBGene00001395 locus:fat-3 status:Confirmed UniProt:Q23221_CAEEL protein_id:CAA94233.2| [wormORF-contam.fasta]
  • FATty acid desaturase family member (fat-3) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein W08D2.4 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE25153 WBGene00001395 locus:fat-3 status:Confirmed UniProt:Q23221 protein_id:CAA94233.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE25153 WBGene00001395 locus:fat-3 status:Confirmed UniProt:Q23221 protein_id:CAA94233.2 Delta(6)-fatty-acid desaturase fat-3 [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 443 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: locomotory behavior [IMPLink to PubMed articleLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    fatty acid biosynthetic process [IEALink to PubMed article]
    transport [IEALink to PubMed article]
    positive regulation of multicellular organism growth [IMPLink to PubMed article]
    Molecular Function: transition metal ion binding [IEALink to PubMed article]
    oxidoreductase activity [IEALink to PubMed article]
    iron ion binding [IEALink to PubMed article]
    oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [IEALink to PubMed article]
    oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water [IEALink to PubMed article]
    binding [IEALink to PubMed article]
    transporter activity [IEALink to PubMed article]
    heme binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVDKNASGL RMKVDGKWLY LSEELVKKHP GGAVIEQYRN SDATHIFHAF HEGSSQAYKQ  60
   61 LDLLKKHGEH DEFLEKQLEK RLDKVDINVS AYDVSVAQEK KMVESFEKLR QKLHDDGLMK 120
  121 ANETYFLFKA ISTLSIMAFA FYLQYLGWYI TSACLLALAW QQFGWLTHEF CHQQPTKNRP 180
  181 LNDTISLFFG NFLQGFSRDW WKDKHNTHHA ATNVIDHDGD IDLAPLFAFI PGDLCKYKAS 240
  241 FEKAILKIVP YQHLYFTAML PMLRFSWTGQ SVQWVFKENQ MEYKVYQRNA FWEQATIVGH 300
  301 WAWVFYQLFL LPTWPLRVAY FIISQMGGGL LIAHVVTFNH NSVDKYPANS RILNNFAALQ 360
  361 ILTTRNMTPS PFIDWLWGGL NYQIEHHLFP TMPRCNLNAC MKYVKEWCKE NNLPYLVDDY 420
  421 FDGYAMNLQQ LKNMAEHIQA KAA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..73] PSI-BLAST 14.0 No description for 2i96A was found.
    2 View Details [74..194] deduced N/A No confident structure predictions are available.
    3 View Details [195..443] MSA 9.616995 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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