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Protein Overview: CE25073

General Information:
Name(s) found: CE25073 [WormBase]
Description(s) found:
Found 15 descriptions.
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  • WBGene00011164 chitinase status:Partially_confirmed UniProt:Q21864 protein_id:CAA93868.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 446 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: carbohydrate metabolic process [IEALink to PubMed article]
    chitin catabolic process [IEALink to PubMed article]
    Molecular Function: chitinase activity [IEALink to PubMed article]
    hydrolase activity, hydrolyzing O-glycosyl compounds [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKQDNKNEI VAPSIHGKKL DRSLWRIYLK YIVIAIVLLV VLGNTIMTII LVVNDVNETG  60
   61 STPTVTSISS TVAASTYPAT PGCNKRIIGY YFATQTSVIT RDQVSKLTHA VFAFVNMTSD 120
  121 GHLQIDGDLA KNRFTNLIEI AKQQTPQVKV MISIGGNDNS NNFKPVLSSP DRKKLFINST 180
  181 VSFLQTYDID GVDLYWKWPG KTSKDIYSQF INDLRYSLQR QKRNYIMSIV LPPPDMGANY 240
  241 EAGIDIENIF DNVDFLNIFT MGYFGPWQND AGMITGAASQ LFNGVNGVPG RKTYNIHHST 300
  301 ERYVCKTGQS DKYNIAIPFY TMLWKHVKGP VNPPNIEIYR NATFQGGVVG ETSMSRKLVQ 360
  361 EEGYDFSNPT YNPEIRAAFK YNATTETFLT FETNDTIAAK IDYVKDRILG GVWIWAVDMD 420
  421 DDSNNLLNLV KFTGYCTVGN LTLYNC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..78] deduced N/A No confident structure predictions are available.
    2 View Details [79..446] PSI-BLAST 85.39794 Specificity and affnity of natural product cyclopentapeptide inhibitor Argadin against human chitinase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • growth factor activity
    		•  0.34357571678721 bayes_pls_golite062009
  • receptor binding
    		•  0.21634641574378 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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