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Protein Overview: dap-3

General Information:
Name(s) found: dap-3 / CE24802 [WormBase]
Description(s) found:
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  • WBGene00000933 locus:dap-3 status:Confirmed UniProt:G5EFC8 protein_id:CAB60994.1 [WormBase]
  • gi|6434250|emb|CAB60994.1| C. elegans protein C14A4.2, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|4433400|gb|AAD20727.1| unknown [Caenorhabditis elegans] [NCBI NR]
  • gi|17532723|ref|NP_496280.1| mammalian cell Death Associated Protein related family member (dap-3) [Caenorhabditis elegans] [NCBI NR]
  • pir||T43049 hypothetical protein - Caenorhabditis elegans [NCBI NR]
  • [wormpep67.fasta]
  • CE24802 WBGene00000933 locus:dap-3 status:Confirmed TR:Q9TVM5 protein_id:CAB60994.1 [wormpep150.fasta]
  • 24802 WBGene00000933 locus:dap-3 status:Confirmed TR:Q9TVM5 protein_id:CAB60994.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • mammalian cell Death Associated Protein related (42.8 kD) (dap-3) [Caenorhabditis elegans]gi|6434250|emb|CAB60994.1| Hypothetical protein C14A4.2 [Caenorhabditis elegans]gi|4433400|gb|AAD20727.1| unknown [Caenorhabditis elegans]gi|11359760|pir||T43049 [nrdb_11152004_Chlamydomonas]
  • locus:dap-3 status:Confirmed TR:Q9TVM5 protein_id:CAB60994.1 [wormpep115.fasta.reversed]
  • CE24802 locus:dap-3 status:Confirmed TR:Q9TVM5 protein_id:CAB60994.1 [wormpep80.hongbin]
  • CE24802 WBGene00000933 locus:dap-3 status:Confirmed UniProt:Q9TVM5_CAEEL protein_id:CAB60994.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE24802 WBGene00000933 locus:dap-3 status:Confirmed UniProt:Q9TVM5_CAEEL protein_id:CAB60994.1| [wormORF-contam.fasta]
  • unknown [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein C14A4.2 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • mammalian cell Death Associated Protein related family member (dap-3) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE24802 WBGene00000933 locus:dap-3 status:Confirmed UniProt:Q9TVM5 protein_id:CAB60994.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE24802 WBGene00000933 locus:dap-3 status:Confirmed UniProt:G5EFC8 protein_id:CAB60994.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Mammalian cell Death Associated Protein related OS=Caenorhabditis elegans GN=dap-3 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 375 amino acids

    Gene Ontology:
    Cellular Component: mitochondrial ribosome [IEALink to PubMed article]
    small ribosomal subunit [IEALink to PubMed article]
    Biological Process: nematode larval development [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    growth [IMPLink to PubMed article]
    Molecular Function: nucleotide binding [IEALink to PubMed article]
    nucleoside-triphosphatase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPCGNLMCQ IARRLPARQL HISRRSNSQL ADVGTLSEIE MPVAKQLNMR NHLPAPLSKQ  60
   61 MDTLGEVVTL IREPMAEVAS CMRVVDKSLP ALRLVLWGAF GTGKSVTLNQ AVHHAYNNKW 120
  121 AIVHLRSAME LTRRVKEIEM SSFVQGRIND PSNSVSILQN FKQQNQHIWK ILGELLTERD 180
  181 YEWSKSERTL KGKPITEIIE MGISAPFLAS DCVGAIFREL RRHAKDDKLK VLVAIDDANS 240
  241 LWGKTLVKRA DRTYAPPSDL TLVVHYRRMI ENDWTNGCVL MVADKKEVAD ARDHLGVSRH 300
  301 TPLELFGEEG FEYVEPFVPI ETSNYTEAET DAIYNYYVNK NWLASKAARS EEGRKQLMHL 360
  361 SAFNPYYYER LCAFN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..63] MSA 1.03999 View MSA. No confident structure predictions are available.
    2 View Details [64..375] FFAS03 1.15 Crystal structure of (13814777) from SULFOLOBUS SOLFATARICUS at 2.00 A resolution

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  2.15223415484989 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  1.34493968116428 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  1.27725136877368 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  1.25622959106807 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  1.25605166511461 bayes_pls_golite062009
  • motor activity
    		•  0.294261683163235 bayes_pls_golite062009
  • protein binding
    		•  0.201869978778282 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.16654890833655 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle