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Protein Overview: arx-3

General Information:
Name(s) found: arx-3 / CE24672 [WormBase]
Description(s) found:
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  • WBGene00000201 locus:arx-3 status:Confirmed UniProt:Q9U1R7 protein_id:CAB54510.1 [WormBase]
  • pir||T27432 hypothetical protein Y79H2A.6 - Caenorhabditis elegans [NCBI NR]
  • gi|5824879|emb|CAB54510.1| C. elegans protein Y79H2A.6, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17556568|ref|NP_499570.1| ARp2/3 compleX component family member (arx-3) [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE24672 WBGene00000201 locus:arx-3 status:Confirmed TR:Q9U1R7 protein_id:CAB54510.1 [wormpep150.fasta]
  • 24672 WBGene00000201 locus:arx-3 status:Confirmed TR:Q9U1R7 protein_id:CAB54510.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • actin related 2 3 complex, Actin Related protein 2/3 compleX component ARX-3 (arx-3AND3N122) [Caenorhabditis elegans]gi|5824879|emb|CAB54510.1| Hypothetical protein Y79H2A.6 [Caenorhabditis elegans]gi|7510520|pir||T27432 hypothetical protein Y79H2A.6 - [nrdb_11152004_Chlamydomonas]
  • locus:arx-3 status:Confirmed TR:Q9U1R7 protein_id:CAB54510.1 [wormpep115.fasta.reversed]
  • CE24672 status:Confirmed TR:Q9U1R7 protein_id:CAB54510.1 [wormpep80.hongbin]
  • CE24672 WBGene00000201 locus:arx-3 status:Confirmed UniProt:Q9U1R7_CAEEL protein_id:CAB54510.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE24672 WBGene00000201 locus:arx-3 status:Confirmed UniProt:Q9U1R7_CAEEL protein_id:CAB54510.1| [wormORF-contam.fasta]
  • ARp2/3 compleX component family member (arx-3) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein Y79H2A.6 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE24672 WBGene00000201 locus:arx-3 status:Confirmed UniProt:Q9U1R7 protein_id:CAB54510.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • ARp2/3 compleX component OS=Caenorhabditis elegans GN=arx-3 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 368 amino acids

    Gene Ontology:
    Cellular Component: cytoskeleton [IEALink to PubMed article]
    Biological Process: locomotory behavior [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    Molecular Function: actin binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSGVPVLHW NFGIGPITCH AWNKDRTQIA VSASSNDIHI FEWRNGDWQS IHTLSEHDLP  60
   61 VTGLDWGTKT NRIVSCSQDK NAFVWTFDKN VWKPELVLVR FNRAATYVKW SPLENKFAVG 120
  121 SGAKLVSVCY YEKENDWWVS KQIKKPIRST VTCLDWHSNN VLLAVGSCDF KCRVFSAYVK 180
  181 EVDEKPSPNP WGQKMPFGQL MSEYSVGGWV HRVAFSPSGC RLAFVSHDSS VSFVDSTVDS 240
  241 QKVQNLLTIH LPFTTVEWIT ENSVVTAGHD CSPVLFVVSQ DVLKEVCKLD VPSAAKSSTV 300
  301 NSALQLFKNI DRNNAAEKIN VALKTLHQNR ITQILPHSGT VGNVVKFTTC GTDGIVALWD 360
  361 LKNHPSLV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..368] PSI-BLAST 54.154902 Arp2/3 complex 41 kDa subunit ARPC1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • actin binding
    		•  3.86142918698875 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  3.1056443224755 bayes_pls_golite062009
  • actin filament binding
    		•  2.0735069176589 bayes_pls_golite062009
  • binding
    		•  1.79788997337153 bayes_pls_golite062009
  • dynein binding
    		•  1.69349714290074 bayes_pls_golite062009
  • protein binding
    		•  1.11897341394404 bayes_pls_golite062009
  • myosin binding
    		•  0.989691178611801 bayes_pls_golite062009
  • tubulin binding
    		•  0.968047176592527 bayes_pls_golite062009
  • microtubule binding
    		•  0.834073483714259 bayes_pls_golite062009
  • transporter activity
    		•  0.692270256454453 bayes_pls_golite062009
    		• 0.45054027253231 bayes_pls_golite062009
  • myosin II binding
    		•  0.33142771724387 bayes_pls_golite062009
  • myosin heavy chain kinase activity
    		•  0.231534552000461 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.121183207943714 bayes_pls_golite062009
  • structural constituent of cytoskeleton
    		•  0.118975415284669 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  0.00585398682921312 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle