| Protein: | arx-3 |
| Organism: | Caenorhabditis elegans |
| Length: | 368 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for arx-3.
| Description | E-value | Query Range |
Subject Range |
|
|
417.0 | [0..1] | [367..1201] |
|
Region A: Residues: [1-368] |
1 11 21 31 41 51
| | | | | |
1 MSSGVPVLHW NFGIGPITCH AWNKDRTQIA VSASSNDIHI FEWRNGDWQS IHTLSEHDLP 60
61 VTGLDWGTKT NRIVSCSQDK NAFVWTFDKN VWKPELVLVR FNRAATYVKW SPLENKFAVG 120
121 SGAKLVSVCY YEKENDWWVS KQIKKPIRST VTCLDWHSNN VLLAVGSCDF KCRVFSAYVK 180
181 EVDEKPSPNP WGQKMPFGQL MSEYSVGGWV HRVAFSPSGC RLAFVSHDSS VSFVDSTVDS 240
241 QKVQNLLTIH LPFTTVEWIT ENSVVTAGHD CSPVLFVVSQ DVLKEVCKLD VPSAAKSSTV 300
301 NSALQLFKNI DRNNAAEKIN VALKTLHQNR ITQILPHSGT VGNVVKFTTC GTDGIVALWD 360
361 LKNHPSLV
|
| Detection Method: |  |
| Confidence: | 54.154902 |
| Match: | 1k8kC |
| Description: | Arp2/3 complex 41 kDa subunit ARPC1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| actin binding | 3.86142918698875 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 3.1056443224755 | bayes_pls_golite062009 |
| actin filament binding | 2.0735069176589 | bayes_pls_golite062009 |
| binding | 1.79788997337153 | bayes_pls_golite062009 |
| dynein binding | 1.69349714290074 | bayes_pls_golite062009 |
| protein binding | 1.11897341394404 | bayes_pls_golite062009 |
| myosin binding | 0.989691178611801 | bayes_pls_golite062009 |
| tubulin binding | 0.968047176592527 | bayes_pls_golite062009 |
| microtubule binding | 0.834073483714259 | bayes_pls_golite062009 |
| transporter activity | 0.692270256454453 | bayes_pls_golite062009 |
| 0.45054027253231 | bayes_pls_golite062009 | |
| myosin II binding | 0.33142771724387 | bayes_pls_golite062009 |
| myosin heavy chain kinase activity | 0.231534552000461 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.121183207943714 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.118975415284669 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.00585398682921312 | bayes_pls_golite062009 |
