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Protein Overview: skr-10

General Information:
Name(s) found: skr-10 / CE24062 [WormBase]
Description(s) found:
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  • WBGene00004816 locus:skr-10 status:Confirmed UniProt:G5EG39 protein_id:CAB54358.1 [WormBase]
  • pir||T26386 hypothetical protein Y105C5B.j - Caenorhabditis elegans [NCBI NR]
  • gi|5824668|emb|CAB54358.1| C. elegans protein Y105C5B.13, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17542036|ref|NP_502902.1| SKp1 Related (ubiquitin ligase complex component) family member (skr-10) [Caenorhabditis elegans] [NCBI NR]
  • gi|17027140|gb|AAL34100.1|AF440512_1 SKR-10 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE24062 WBGene00004816 locus:skr-10 status:Confirmed TR:Q9NAM6 protein_id:CAB54358.1 [wormpep150.fasta]
  • 24062 WBGene00004816 locus:skr-10 status:Confirmed TR:Q9NAM6 protein_id:CAB54358.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • SKp1 Related, ubiquitin ligase complex component, required for posterior body morphogenesis, embryonic and larval development, and cell proliferation; interacts with cullin CUL-1 in the yeast two-hybrid system (20.9 kD) (skr-10) [Caenorhabditis elegans]g [nrdb_11152004_Chlamydomonas]
  • locus:skr-10 status:Confirmed TR:Q9NAM6 protein_id:CAB54358.1 [wormpep115.fasta.reversed]
  • CE24062 locus:skr-10 status:Confirmed TR:Q9NAM6 protein_id:CAB54358.1 [wormpep80.hongbin]
  • CE24062 WBGene00004816 locus:skr-10 status:Confirmed UniProt:Q9NAM6_CAEEL protein_id:CAB54358.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE24062 WBGene00004816 locus:skr-10 status:Confirmed UniProt:Q9NAM6_CAEEL protein_id:CAB54358.1| [wormORF-contam.fasta]
  • Hypothetical protein Y105C5B.13 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • SKR-10 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • SKp1 Related (ubiquitin ligase complex component) family member (skr-10) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE24062 WBGene00004816 locus:skr-10 status:Confirmed UniProt:Q9NAM6 protein_id:CAB54358.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE24062 WBGene00004816 locus:skr-10 status:Confirmed UniProt:G5EG39 protein_id:CAB54358.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • SKR-10 OS=Caenorhabditis elegans GN=skr-10 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 192 amino acids

    Gene Ontology:
    Cellular Component: SCF ubiquitin ligase complex [IPILink to PubMed article]
    Biological Process: embryonic development [IMPLink to PubMed article]
    cell proliferation [IMPLink to PubMed article]
    post-embryonic body morphogenesis [IMPLink to PubMed article]
    larval development [IMPLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAEVAAVEI QEAPVAAPIM YKVESNDGTV FEISDEAVKQ SNTLSNLIST CAPEDVASMD  60
   61 PIPITNVTGN ILKMVIEWCE KHKGEALPVD DDSVPKHITV PEWDTNFLKI DNEVLFDLIV 120
  121 ACNYLDVPGL MNYGCKMVAM MAIGKSPDEL RIIFAIPTDE EDEAAERAAK EKAEAEKKAN 180
  181 AEKDAAEPST SK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..192] PSI-BLAST 57.522879 No description for 2e31B was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle