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Protein Overview: clec-125

General Information:
Name(s) found: clec-125 / CE24045 [WormBase]
Description(s) found:
Found 15 descriptions.
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  • WBGene00021118 locus:clec-125 status:Partially_confirmed UniProt:O16642 protein_id:AAF02173.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 621 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: sugar binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKIGSRNRG NGPCVDLTTY YSVEEDYDGK SDDDGSKYWM VEDLEQTLKL RSDAQEDQKM  60
   61 KLQVEKSSRS SKDQSLDLGD SKTGIALVGV KLQADGSQGS KDQNLVGKIQ KDQASQKDQK 120
  121 LNLQANESSR NSKDQSSDSS GSKSGNAKVI MELQADGTYR LKDQKLTAKI QKDQNSDSKT 180
  181 IEDIFNREFE ADGLKDQNSK SKDSNTDEAS LNVKLQGSQA SKDQKASSGA FKSLLSQSSD 240
  241 LTASSSNLTA QLTSTNLGGS GSELSQKLND LKSNSDSSDQ VHLASHQHTR NELSQKTDLS 300
  301 VTTDEKNQKT GFSQNHLINS SLAVSELNNN GKLSGTEVQE TVEINQRKDL GNLRDQSSKN 360
  361 LKLEGSEALR SSVDLKKRSL EDQKLSSKDL KTGVAGAQSS SSSDRKDQSS SSTDLNTDAS 420
  421 QLELNQNQKR VLIGSDVPLT GEACSKKEQG NCEAGWKSFL RPSGEWCMKI FYENSITQPS 480
  481 AENRCQAQGA TLSGLQNQIE SFYITYTVSS HIYPESGSIW IGLKRREECK NVGRTQNCTS 540
  541 DNSFEWTDKS TTGLDGIDWD GGQPDNARRY SQQCATLTAS HQRSVIGYHV GRLDDVGCEF 600
  601 DYIKTNRKQR DIKAFVCGKK A

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..440] PSI-BLAST 12.30103 Heavy meromyosin subfragment
    2 View Details [441..621] PSI-BLAST 26.30103 Structure of the C-type lectin domain of CD23


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle