| Protein: | clec-125 |
| Organism: | Caenorhabditis elegans |
| Length: | 621 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for clec-125.
| Description | E-value | Query Range |
Subject Range |
|
|
187.0 | [0..6] | [394..424] |
|
Region A: Residues: [1-440] |
1 11 21 31 41 51
| | | | | |
1 MLKIGSRNRG NGPCVDLTTY YSVEEDYDGK SDDDGSKYWM VEDLEQTLKL RSDAQEDQKM 60
61 KLQVEKSSRS SKDQSLDLGD SKTGIALVGV KLQADGSQGS KDQNLVGKIQ KDQASQKDQK 120
121 LNLQANESSR NSKDQSSDSS GSKSGNAKVI MELQADGTYR LKDQKLTAKI QKDQNSDSKT 180
181 IEDIFNREFE ADGLKDQNSK SKDSNTDEAS LNVKLQGSQA SKDQKASSGA FKSLLSQSSD 240
241 LTASSSNLTA QLTSTNLGGS GSELSQKLND LKSNSDSSDQ VHLASHQHTR NELSQKTDLS 300
301 VTTDEKNQKT GFSQNHLINS SLAVSELNNN GKLSGTEVQE TVEINQRKDL GNLRDQSSKN 360
361 LKLEGSEALR SSVDLKKRSL EDQKLSSKDL KTGVAGAQSS SSSDRKDQSS SSTDLNTDAS 420
421 QLELNQNQKR VLIGSDVPLT
|
| Detection Method: |  |
| Confidence: | 12.30103 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [441-621] |
1 11 21 31 41 51
| | | | | |
1 GEACSKKEQG NCEAGWKSFL RPSGEWCMKI FYENSITQPS AENRCQAQGA TLSGLQNQIE 60
61 SFYITYTVSS HIYPESGSIW IGLKRREECK NVGRTQNCTS DNSFEWTDKS TTGLDGIDWD 120
121 GGQPDNARRY SQQCATLTAS HQRSVIGYHV GRLDDVGCEF DYIKTNRKQR DIKAFVCGKK 180
181 A
|
| Detection Method: | |
| Confidence: | 26.30103 |
| Match: | 1t8cA |
| Description: | Structure of the C-type lectin domain of CD23 |
Matching Structure (courtesy of the PDB): |
|
