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Protein Overview: CE23957

General Information:
Name(s) found: CE23957 [WormBase]
Description(s) found:
Found 19 descriptions.
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  • WBGene00020340 status:Partially_confirmed UniProt:O44557 protein_id:CCD72108.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 591 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    integral to membrane [IEALink to PubMed article]
    Biological Process: ion transport [IEALink to PubMed article]
    nematode larval development [IMPLink to PubMed articleLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    carbohydrate transport [IEALink to PubMed article]
    transport [IEALink to PubMed article]
    growth [IMPLink to PubMed articleLink to PubMed article]
    Molecular Function: ion transmembrane transporter activity [IEALink to PubMed article]
    sugar:hydrogen symporter activity [IEALink to PubMed article]
    transporter activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEFEEVELK QIRPTYAKKR KEKKDVVFYT NFEEVLQKIG AFGPYQIFCF IVILYASIEW  60
   61 AGNSTFMHLL GSFEPDWNCT LANNQTVIIT APTHDDTCNF IKQNCTNLAP VKQNLEFFSI 120
  121 VGQFQLICDD SDKVEYIEVI MAGSSLIGSI IGGHMGDHFG RQTIFFTGEL LIIITSMMCT 180
  181 AAQSWIAFSV IQGVNCFLYG VIETTSLTMM VEFTSNKFRV IMVNAFQWPI AYMTIALIAW 240
  241 LTQGWQVYFV FLNLVSSPLA IGFMLFLESP RWLIARNDLS EACEVLNDIA HQRWNNTKAR 300
  301 FTTKDISAIH KQEKQGFYWF YHLFSTKRLA KQSCLQIISV LTYAMVSNTY LFTVAGLHDS 360
  361 PIISTLIDGV LRLFIPIIIV IFDLMVPSFG RKIQFLGSLV IEGILFGVVI ALVATGTCTY 420
  421 DSKAVNILVI VTTMINDCIF WINIVQITTQ RYPTVIRCVA FGFLHSFRHI GAIIGFLILK 480
  481 PLLTSTWPVG AFVIPEAMIV LTILVGFFFQ PETKGKALMD QMVEANYGRL ENELPRALMR 540
  541 LAAGHRVDQS ETRQQHRKDM ESAKAAELMG KKVSSPWVFK EKDSGPNVKE D

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..591] PSI-BLAST 31.69897 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • substrate-specific transmembrane transporter activity
    		•  5.46247398538901 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  4.58978526526921 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  4.31967711223954 bayes_pls_golite062009
  • transporter activity
    		•  4.09176719149278 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.59744164024479 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.5865018981083 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.59419818573076 bayes_pls_golite062009
  • binding
    		•  1.26757615356623 bayes_pls_golite062009
  • organic acid transmembrane transporter activity
    		•  1.24937104052238 bayes_pls_golite062009
  • anion transmembrane transporter activity
    		•  1.24023641504332 bayes_pls_golite062009
  • secondary active transmembrane transporter activity
    		•  1.22264637452409 bayes_pls_golite062009
  • polyol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • alcohol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • glycerol transmembrane transporter activity
    		•  0.812001619402678 bayes_pls_golite062009
  • symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • solute:cation symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • cation:sugar symporter activity
    		•  0.143419068761182 bayes_pls_golite062009
  • sugar:hydrogen symporter activity
    		•  0.143419068761182 bayes_pls_golite062009
  • inorganic anion transmembrane transporter activity
    		•  0.05725800478022 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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