YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: klc-1

General Information:
Name(s) found: klc-1 / CE23882 [WormBase]
Description(s) found:
Found 19 descriptions.
SHOW ALL
  • WBGene00002214 locus:klc-1 status:Confirmed UniProt:Q21592 protein_id:CAA92746.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 516 amino acids

    Gene Ontology:
    Cellular Component: kinesin complex [IEALink to PubMed article]
    Biological Process: embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    Molecular Function: microtubule motor activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVISLGDDIT TVLKTVQQTL FALRDEHEAA TRILEANLIN SDSSEPSLPS EKMGLIDESL  60
   61 GKVMDGGDEA SLLIMMDKLM QSYDVQLSKN HESIRLLRQE NTWLLDELTT TQRKLQESER 120
  121 TVAHLEEERD HYKFQDSMNY LNSDFQHTTS VDATPMMVDT LQELGFGPEE EDQNNNQADQ 180
  181 GCRSSSFSNP ISNDYQLPTR LQTLQNLVIQ YMEQGRFEVA IPLCKQALED VVKVHGNVHL 240
  241 DVATMLNVLA IVYRNQENFK DAAIYLEKAL SIRVQCCGEN HHSVAATLNN LAIAYGKRGK 300
  301 YKESEPLCKR ALEIRKNLLG PNHPDVAKQL TNLGIVTQQL EKYEETENYF KQALSIYNRA 360
  361 FPENHQNVIK TKNQLASVFL KQGKYQEAEE MYKNILSKVA ITGNKPIWRI AEDREERQRN 420
  421 GIPKVDDESF NVNPTTVMDS NVMSTIKNLA AVYRKQGKEE AAGTLEEALG AKKQINGGAD 480
  481 HTNSTASSVE TSSAVAINPA QSGIKKRIMH FVGLNF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run knl-1 No Comments Cheeseman, I.M., et al. (2004)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..89] PSI-BLAST 5.0 Crystal structure of E.coli TPR-protein NlpI
    2 View Details [90..516] PSI-BLAST 44.522879 The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  2.14253214573541 bayes_pls_golite062009
  • protein binding
    		•  1.65083457326273 bayes_pls_golite062009
  • signal sequence binding
    		•  0.49295886046194 bayes_pls_golite062009
  • peroxisome targeting sequence binding
    		•  0.0468412220974996 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle