| Protein: | klc-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 516 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for klc-1.
| Description | E-value | Query Range |
Subject Range |
|
|
382.0 | [0..4] | [514..197] |
|
Region A: Residues: [1-89] |
1 11 21 31 41 51
| | | | | |
1 MVISLGDDIT TVLKTVQQTL FALRDEHEAA TRILEANLIN SDSSEPSLPS EKMGLIDESL 60
61 GKVMDGGDEA SLLIMMDKLM QSYDVQLSK
|
| Detection Method: |  |
| Confidence: | 5.0 |
| Match: | 1xnfA |
| Description: | Crystal structure of E.coli TPR-protein NlpI |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [90-516] |
1 11 21 31 41 51
| | | | | |
1 NHESIRLLRQ ENTWLLDELT TTQRKLQESE RTVAHLEEER DHYKFQDSMN YLNSDFQHTT 60
61 SVDATPMMVD TLQELGFGPE EEDQNNNQAD QGCRSSSFSN PISNDYQLPT RLQTLQNLVI 120
121 QYMEQGRFEV AIPLCKQALE DVVKVHGNVH LDVATMLNVL AIVYRNQENF KDAAIYLEKA 180
181 LSIRVQCCGE NHHSVAATLN NLAIAYGKRG KYKESEPLCK RALEIRKNLL GPNHPDVAKQ 240
241 LTNLGIVTQQ LEKYEETENY FKQALSIYNR AFPENHQNVI KTKNQLASVF LKQGKYQEAE 300
301 EMYKNILSKV AITGNKPIWR IAEDREERQR NGIPKVDDES FNVNPTTVMD SNVMSTIKNL 360
361 AAVYRKQGKE EAAGTLEEAL GAKKQINGGA DHTNSTASSV ETSSAVAINP AQSGIKKRIM 420
421 HFVGLNF
|
| Detection Method: | |
| Confidence: | 44.522879 |
| Match: | 1w3bA |
| Description: | The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.14253214573541 | bayes_pls_golite062009 |
| protein binding | 1.65083457326273 | bayes_pls_golite062009 |
| signal sequence binding | 0.49295886046194 | bayes_pls_golite062009 |
| peroxisome targeting sequence binding | 0.0468412220974996 | bayes_pls_golite062009 |
